Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 22 134 NP_001034568 17 3301 XP_005268301 17 3301 XP_006720407 17 3301 NP_000811 17 4312 NP_001267474 16 5631 NP_060732 16 5631 NP_443715 16 5631 NP_443716 16 5631 NP_001267470 16 5631 NP_443711 16 5631 NP_001267475 16 5631 NP_001158268 16 5631 NP_064506 16 5631 NP_775742 16 5631 NP_056039 16 5631 XP_006713757 16 5631 XP_006713756 16 5631 XP_005247668 16 5631 XP_006713755 16 5631 XP_005247667 16 5631 XP_005247666 16 5631 XP_005247665 16 5631 XP_005247664 16 5631 XP_006713754 16 5631 XP_006713753 16 5631 XP_005247661 16 5631 XP_006713752 16 5631 XP_005247660 16 5631 XP_006713141 16 5631 XP_006713140 16 5631 XP_005265056 16 5631 XP_006713021 16 5631 XP_006713020 16 5631 XP_006713019 16 5631 NP_031392 16 7355 NP_001007268 16 7355 NP_001182570 16 7355 NP_001269695 16 7355 NP_001098714 16 7355 XP_006722401 16 7355 XP_006722400 16 7355 XP_006722399 16 7355 XP_006722398 16 7355 XP_005246450 16 7355 XP_005246449 16 7355 XP_005264288 16 7355 NP_002836 16 7355 NP_001274152 15 9605 NP_001158213 15 9605 NP_001657 15 9605 NP_997320 15 9605 NP_689783 15 9605 NP_001245211 15 9605 NP_056288 15 9605 NP_689716 15 9605 NP_054858 15 9605 NP_998797 15 9605 NP_998796 15 9605 XP_005253612 15 9605 XP_005251429 15 9605 NP_001005234 15 9605>NP_004251 Length = 1208 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRTFQVFHS 9 RRTFQ FHS Sbjct: 1071 RRTFQAFHS 1079>NP_001034568 Length = 823 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRTFQVF 7 R+TFQVF Sbjct: 238 RQTFQVF 244>XP_005268301 Length = 662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRTFQVF 7 R+TFQVF Sbjct: 77 RQTFQVF 83>XP_006720407 Length = 813 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRTFQVF 7 R+TFQVF Sbjct: 228 RQTFQVF 234>NP_000811 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRTFQVF 7 RR FQVF Sbjct: 47 RRAFQVF 53>NP_001267474 Length = 1091 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1061 FQMFHS 1066>NP_060732 Length = 1182 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1152 FQMFHS 1157>NP_443715 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1211 FQMFHS 1216>NP_443716 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1101 FQMFHS 1106>NP_001267470 Length = 1234 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1204 FQMFHS 1209>NP_443711 Length = 1292 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1262 FQMFHS 1267>NP_001267475 Length = 1032 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1002 FQMFHS 1007>NP_001158268 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RTFQVF 7 RTFQ+F Sbjct: 35 RTFQIF 40>NP_064506 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 RTFQVFH 8 RTF FH Sbjct: 193 RTFSAFH 199>NP_775742 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RTFQVF 7 RTFQ+F Sbjct: 123 RTFQIF 128>NP_056039 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQV+HS Sbjct: 1158 FQVYHS 1163>XP_006713757 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1004 FQMFHS 1009>XP_006713756 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1063 FQMFHS 1068>XP_005247668 Length = 1132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1102 FQMFHS 1107>XP_006713755 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1135 FQMFHS 1140>XP_005247667 Length = 1183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1153 FQMFHS 1158>XP_005247666 Length = 1183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1153 FQMFHS 1158>XP_005247665 Length = 1184 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1154 FQMFHS 1159>XP_005247664 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1161 FQMFHS 1166>XP_006713754 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1194 FQMFHS 1199>XP_006713753 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1195 FQMFHS 1200>XP_005247661 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1212 FQMFHS 1217>XP_006713752 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1212 FQMFHS 1217>XP_005247660 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQ+FHS Sbjct: 1213 FQMFHS 1218>XP_006713141 Length = 1274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQV+HS Sbjct: 1199 FQVYHS 1204>XP_006713140 Length = 1629 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQV+HS Sbjct: 1554 FQVYHS 1559>XP_005265056 Length = 1670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 FQV+HS Sbjct: 1595 FQVYHS 1600>XP_006713021 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RTFQVF 7 RTFQ+F Sbjct: 123 RTFQIF 128>XP_006713020 Length = 174 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RTFQVF 7 RTFQ+F Sbjct: 123 RTFQIF 128>XP_006713019 Length = 259 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RTFQVF 7 RTFQ+F Sbjct: 123 RTFQIF 128>NP_031392 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 F+VFHS Sbjct: 678 FKVFHS 683>NP_001007268 Length = 1324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 F+VFHS Sbjct: 678 FKVFHS 683>NP_001182570 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 F+VFHS Sbjct: 678 FKVFHS 683>NP_001269695 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 FQVFH 8 FQVFH Sbjct: 12 FQVFH 16>NP_001098714 Length = 1465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1425 QRTVDVFHA 1433>XP_006722401 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1392 QRTVDVFHA 1400>XP_006722400 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1429 QRTVDVFHA 1437>XP_006722399 Length = 1477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1437 QRTVDVFHA 1445>XP_006722398 Length = 1494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1454 QRTVDVFHA 1462>XP_005246450 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 F+VFHS Sbjct: 678 FKVFHS 683>XP_005246449 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQVFHS 9 F+VFHS Sbjct: 678 FKVFHS 683>XP_005264288 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 R+T VFHS Sbjct: 168 RQTETVFHS 176>NP_002836 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTFQVFHS 9 +RT VFH+ Sbjct: 1412 QRTVDVFHA 1420>NP_001274152 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 RTF+VF + Sbjct: 222 RTFRVFRA 229>NP_001158213 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 RRTFQVFH 8 ++T+Q +H Sbjct: 168 KKTYQAYH 175>NP_001657 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 RRTFQVFH 8 ++T+Q +H Sbjct: 168 KKTYQAYH 175>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TFQVFH 8 TFQ FH Sbjct: 4117 TFQPFH 4122>NP_689783 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 R+F+ FHS Sbjct: 391 RSFKDFHS 398>NP_001245211 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 R+F+ FHS Sbjct: 391 RSFKDFHS 398>NP_056288 Length = 2046 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 +T+Q+ HS Sbjct: 1877 KTYQLLHS 1884>NP_689716 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRTFQVF 7 R+TFQ F Sbjct: 305 RQTFQAF 311>NP_054858 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 RTF+VF + Sbjct: 222 RTFRVFRA 229>NP_998797 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRTFQVF 7 R+TFQ F Sbjct: 305 RQTFQAF 311>NP_998796 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRTFQVF 7 R+TFQ F Sbjct: 305 RQTFQAF 311>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TFQVFH 8 TFQ FH Sbjct: 4235 TFQPFH 4240>XP_005251429 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTFQVFHS 9 R+F+ FHS Sbjct: 391 RSFKDFHS 398>NP_001005234 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 TFQVFHS 9 TF FHS Sbjct: 150 TFSYFHS 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.141 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,349 Number of extensions: 753 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |