Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_060193 18 1135 NP_055118 17 2528 NP_001230154 17 2528 XP_006724236 17 2528 NP_060718 17 3301 NP_006209 17 4312 NP_001240813 17 4312 NP_689624 17 4312 NP_079420 17 4312 NP_001095876 17 4312 XP_005263305 17 4312 XP_005263304 17 4312 XP_006714389 17 4312 XP_005263303 17 4312 XP_005263302 17 4312 XP_006713721 17 4312 NP_001119580 16 5631 NP_000330 16 5631 NP_001119579 16 5631 NP_054828 16 5631 XP_005256176 16 5631 NP_683762 16 5631 NP_001265571 16 7355 NP_055844 16 7355 NP_001138508 16 7355 NP_031383 16 7355 NP_001139332 16 7355 NP_061907 16 7355 NP_005702 16 7355 NP_001005205 16 7355 NP_001166245 16 7355 XP_006723108 16 7355 XP_005258618 16 7355 XP_005273481 16 7355 NP_997208 16 7355 NP_001139333 16 7355 NP_001027006 16 7355 NP_871001 16 7355 NP_001004064 16 7355 NP_060668 15 9605 NP_005852 15 9605 NP_001004063 15 9605 NP_056207 15 9605 NP_000439 15 9605 NP_078788 15 9605 NP_997223 15 9605 NP_000951 15 9605 NP_001073918 15 9605 XP_005259152 15 9605 XP_005259150 15 9605 XP_005273931 15 9605 XP_005273930 15 9605 XP_005253098 15 9605 XP_006717743 15 9605 NP_001005275 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RRLCILRM 8 RRLCILRM Sbjct: 496 RRLCILRM 503>NP_060193 Length = 423 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRLCILRMR 9 RR+C+LR R Sbjct: 34 RRVCVLRKR 42>NP_055118 Length = 588 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 RRLCIL+ Sbjct: 35 RRLCILK 41>NP_001230154 Length = 583 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 RRLCIL+ Sbjct: 35 RRLCILK 41>XP_006724236 Length = 587 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 RRLCIL+ Sbjct: 35 RRLCILK 41>NP_060718 Length = 605 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLCILRM 8 RLCILR+ Sbjct: 512 RLCILRV 518>NP_006209 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRLCILRM 8 RRLC LR+ Sbjct: 87 RRLCDLRL 94>NP_001240813 Length = 1166 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 795 RLCILR 800>NP_689624 Length = 782 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 R+LC+LR Sbjct: 251 RKLCLLR 257>NP_079420 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 873 RLCILR 878>NP_001095876 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 873 RLCILR 878>XP_005263305 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 795 RLCILR 800>XP_005263304 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 795 RLCILR 800>XP_006714389 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 853 RLCILR 858>XP_005263303 Length = 1245 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 873 RLCILR 878>XP_005263302 Length = 1245 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLCILR Sbjct: 873 RLCILR 878>XP_006713721 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRLCILRM 8 RRLC LR+ Sbjct: 87 RRLCDLRL 94>NP_001119580 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LCILRMR 9 +C++RMR Sbjct: 771 VCVMRMR 777>NP_000330 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LCILRMR 9 +C++RMR Sbjct: 771 VCVMRMR 777>NP_001119579 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LCILRMR 9 +C++RMR Sbjct: 770 VCVMRMR 776>NP_054828 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RRLCILRM 8 + +C+LRM Sbjct: 1289 KEMCVLRM 1296>XP_005256176 Length = 1020 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LCILRMR 9 +C++RMR Sbjct: 770 VCVMRMR 776>NP_683762 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RLCILRMR 9 ++C+LR+R Sbjct: 28 KVCVLRVR 35>NP_001265571 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRLCILRM 8 RR C LRM Sbjct: 292 RRHCTLRM 299>NP_055844 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LCILRMR 9 LC+LR R Sbjct: 803 LCVLRSR 809>NP_001138508 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 RRLCILRM 8 +++C+LR+ Sbjct: 126 KKMCVLRL 133>NP_031383 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 RRLCILRM 8 +++C+LR+ Sbjct: 126 KKMCVLRL 133>NP_001139332 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LCILRMR 9 LC+LR R Sbjct: 803 LCVLRSR 809>NP_061907 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRLCIL 6 RRLC+L Sbjct: 205 RRLCLL 210>NP_005702 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRLCILRM 8 RR C LRM Sbjct: 302 RRHCTLRM 309>NP_001005205 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRLCIL 6 RRLC+L Sbjct: 138 RRLCLL 143>NP_001166245 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 +R+CI+R Sbjct: 518 KRICIMR 524>XP_006723108 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 +R+CI+R Sbjct: 322 KRICIMR 328>XP_005258618 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 +R+CI+R Sbjct: 484 KRICIMR 490>XP_005273481 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RLCILRM 8 RLC L+M Sbjct: 544 RLCFLKM 550>NP_997208 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RRLCILR 7 +R+CI+R Sbjct: 518 KRICIMR 524>NP_001139333 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LCILRMR 9 LC+LR R Sbjct: 803 LCVLRSR 809>NP_001027006 Length = 1149 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RLCILRM 8 RLC L+M Sbjct: 544 RLCFLKM 550>NP_871001 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 RLC+LR Sbjct: 189 RLCLLR 194>NP_001004064 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRLCIL 6 RRLC+L Sbjct: 138 RRLCLL 143>NP_060668 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRLCIL 6 RRLC+L Sbjct: 35 RRLCML 40>NP_005852 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRLCILRMR 9 R LC L+M+ Sbjct: 66 RALCYLKMQ 74>NP_001004063 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRLCIL 6 RRLC++ Sbjct: 138 RRLCVI 143>NP_056207 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LCILRMR 9 LC+ RMR Sbjct: 77 LCVPRMR 83>NP_000439 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 R+CILR Sbjct: 314 RVCILR 319>NP_078788 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LCILRM 8 +C+LRM Sbjct: 231 ICVLRM 236>NP_997223 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 R+CILR Sbjct: 114 RVCILR 119>NP_000951 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 CILRMR 9 C LRMR Sbjct: 170 CFLRMR 175>NP_001073918 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRLCILR 7 + LCILR Sbjct: 77 KELCILR 83>XP_005259152 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 CILRMR 9 C LRMR Sbjct: 170 CFLRMR 175>XP_005259150 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 CILRMR 9 C LRMR Sbjct: 170 CFLRMR 175>XP_005273931 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 R+CILR Sbjct: 114 RVCILR 119>XP_005273930 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 R+CILR Sbjct: 114 RVCILR 119>XP_005253098 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLCILR 7 R+CILR Sbjct: 314 RVCILR 319>XP_006717743 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRLCILR 7 + LCILR Sbjct: 107 KELCILR 113>NP_001005275 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RRLCILRM 8 RR+C+L + Sbjct: 166 RRVCVLML 173Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.366 0.161 0.546 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 588,684 Number of extensions: 857 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |