Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_612152 17 2528 XP_006715715 17 2528 NP_542415 17 4312 NP_542416 17 4312 NP_542414 17 4312 NP_006255 17 4312 XP_005263224 17 4312 NP_001274141 16 5631 NP_001269714 16 5631 NP_006368 16 5631 NP_060476 16 5631 NP_065867 16 5631 NP_001116291 16 5631 NP_001269711 16 5631 XP_006716779 16 5631 XP_005246008 16 5631 XP_005246007 16 5631 NP_001157032 16 7355 NP_689977 16 7355 NP_653213 16 7355 XP_006722450 16 7355 XP_006722449 16 7355 XP_006722448 16 7355 XP_006722447 16 7355 NP_065948 15 9605 NP_114037 15 9605 NP_114036 15 9605 NP_061732 15 9605 XP_005276805 15 9605 XP_005245431 15 9605 NP_114062 15 9605 NP_061734 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 267 RNSFEVRV 274>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 228 RNSFEVRV 235>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 267 RNSFEVRV 274>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 267 RNSFEVRV 274>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 228 RNSFEVRV 235>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 228 RNSFEVRV 235>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 228 RNSFEVRV 235>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 267 RNSFEVRV 274>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 228 RNSFEVRV 235>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 135 RNSFEVRV 142>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 135 RNSFEVRV 142>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 135 RNSFEVRV 142>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 108 RNSFEVRV 115>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 108 RNSFEVRV 115>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNSFEVRV Sbjct: 108 RNSFEVRV 115>NP_612152 Length = 2849 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNSFEVRVF 9 RNS E RVF Sbjct: 874 RNSSETRVF 882>XP_006715715 Length = 2023 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNSFEVRVF 9 RNS E RVF Sbjct: 826 RNSSETRVF 834>NP_542415 Length = 2294 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSFEVRVF 9 N+FEV++F Sbjct: 1307 NTFEVKLF 1314>NP_542416 Length = 2490 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSFEVRVF 9 N+FEV++F Sbjct: 1503 NTFEVKLF 1510>NP_542414 Length = 2485 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSFEVRVF 9 N+FEV++F Sbjct: 1498 NTFEVKLF 1505>NP_006255 Length = 2466 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSFEVRVF 9 N+FEV++F Sbjct: 1479 NTFEVKLF 1486>XP_005263224 Length = 2491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSFEVRVF 9 N+FEV++F Sbjct: 1504 NTFEVKLF 1511>NP_001274141 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNS++VR+ Sbjct: 342 RNSYDVRL 349>NP_001269714 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNSFEVR 7 RN FEVR Sbjct: 152 RNRFEVR 158>NP_006368 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSFEVRV 8 NSF+VR+ Sbjct: 1224 NSFQVRI 1230>NP_060476 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNSFEVR 7 RN FEVR Sbjct: 152 RNRFEVR 158>NP_065867 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNS++VR+ Sbjct: 442 RNSYDVRL 449>NP_001116291 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNS++VR+ Sbjct: 442 RNSYDVRL 449>NP_001269711 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNSFEVR 7 RN FEVR Sbjct: 38 RNRFEVR 44>XP_006716779 Length = 2399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSFEVRV 8 NSF+VR+ Sbjct: 2032 NSFQVRI 2038>XP_005246008 Length = 984 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNS++VR+ Sbjct: 442 RNSYDVRL 449>XP_005246007 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RNS++VR+ Sbjct: 442 RNSYDVRL 449>NP_001157032 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSFEVRVF 9 NSF R+F Sbjct: 3 NSFAARIF 10>NP_689977 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSFEVRVF 9 NSF R+F Sbjct: 3 NSFAARIF 10>NP_653213 Length = 2211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RN++EV+V Sbjct: 1021 RNTYEVQV 1028>XP_006722450 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RN++EV+V Sbjct: 52 RNTYEVQV 59>XP_006722449 Length = 1256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RN++EV+V Sbjct: 52 RNTYEVQV 59>XP_006722448 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RN++EV+V Sbjct: 52 RNTYEVQV 59>XP_006722447 Length = 1933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNSFEVRV 8 RN++EV+V Sbjct: 743 RNTYEVQV 750>NP_065948 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSFEVRVF 9 N F +RVF Sbjct: 58 NKFSLRVF 65>NP_114037 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNSFEVRVF 9 ++ +EVR+F Sbjct: 244 QSEYEVRIF 252>NP_114036 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNSFEVRVF 9 ++ +EVR+F Sbjct: 244 QSEYEVRIF 252>NP_061732 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNSFEVRVF 9 ++ +EVR+F Sbjct: 244 QSEYEVRIF 252>XP_005276805 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSFEVRVF 9 N F +RVF Sbjct: 58 NKFSLRVF 65>XP_005245431 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NSFEVRVF 9 N F +RVF Sbjct: 58 NKFSLRVF 65>NP_114062 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNSFEVRVF 9 ++ +EVR+F Sbjct: 244 QSEYEVRIF 252>NP_061734 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNSFEVRVF 9 ++ +EVR+F Sbjct: 244 QSEYEVRIF 252Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.146 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 409,412 Number of extensions: 638 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |