Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 20 390 NP_861969 20 390 NP_000259 20 390 NP_861968 20 390 NP_861966 20 390 NP_861970 20 390 NP_861546 20 390 NP_861967 20 390 NP_002435 18 1135 XP_005262326 18 1135 NP_003370 17 2528 NP_001104547 17 2528 NP_001247421 17 2528 NP_001247423 17 2528 NP_001247422 17 2528 NP_002897 17 2528 XP_006715624 17 2528 NP_006141 17 3301 XP_005272662 17 3301 NP_005137 17 3301 NP_001269569 16 5631 NP_001269572 16 5631 NP_071931 16 5631 NP_065801 16 5631 NP_001188405 16 5631 NP_113634 16 5631 XP_005258421 16 5631 NP_001231509 16 7355 NP_003487 16 7355 NP_065811 16 7355 XP_006712712 16 7355 XP_006712711 16 7355 XP_006712710 16 7355 XP_006712709 16 7355 NP_001277007 15 9605 NP_000450 15 9605 NP_001277006 15 9605 NP_001020414 15 9605 NP_001020413 15 9605 NP_001560 15 9605 NP_057191 15 9605 NP_056473 15 9605 NP_003747 15 9605 XP_005274725 15 9605 XP_005255669 15 9605 XP_005251620 15 9605 XP_005251618 15 9605 XP_005250685 15 9605 XP_005250684 15 9605 XP_005250683 15 9605 XP_005250682 15 9605 XP_006714540 15 9605 XP_006713468 15 9605 XP_005265616 15 9605>NP_057502 Length = 590 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 249 RLTPKISF 256>NP_861969 Length = 507 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 166 RLTPKISF 173>NP_000259 Length = 595 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 249 RLTPKISF 256>NP_861968 Length = 507 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 166 RLTPKISF 173>NP_861966 Length = 548 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 207 RLTPKISF 214>NP_861970 Length = 590 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 249 RLTPKISF 256>NP_861546 Length = 590 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 249 RLTPKISF 256>NP_861967 Length = 549 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLTPKISF 8 RLTPKISF Sbjct: 208 RLTPKISF 215>NP_002435 Length = 577 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 RLTPKI F Sbjct: 233 RLTPKIGF 240>XP_005262326 Length = 578 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 RLTPKI F Sbjct: 234 RLTPKIGF 241>NP_003370 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001104547 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001247421 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001247423 Length = 447 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 97 KLTPKIGF 104>NP_001247422 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_002897 Length = 583 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>XP_006715624 Length = 543 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_006141 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TPKISFR 9 TP++SFR Sbjct: 471 TPRVSFR 477>XP_005272662 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TPKISFR 9 TP++SFR Sbjct: 403 TPRVSFR 409>NP_005137 Length = 800 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTPKISFR 9 +LTPK +FR Sbjct: 719 KLTPKEAFR 727>NP_001269569 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_001269572 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_071931 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLTPKISF 8 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_065801 Length = 1204 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTPKISFR 9 RL PK SF+ Sbjct: 452 RLDPKTSFQ 460>NP_001188405 Length = 130 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPKI Sbjct: 64 RLTPKI 69>NP_113634 Length = 220 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPKI Sbjct: 64 RLTPKI 69>XP_005258421 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPKI Sbjct: 70 RLTPKI 75>NP_001231509 Length = 3859 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLTPKIS 7 RLTP IS Sbjct: 3730 RLTPNIS 3736>NP_003487 Length = 3830 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLTPKIS 7 RLTP IS Sbjct: 3701 RLTPNIS 3707>NP_065811 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TPKISFR 9 TPK SFR Sbjct: 381 TPKHSFR 387>XP_006712712 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TPKISFR 9 TPK SFR Sbjct: 223 TPKHSFR 229>XP_006712711 Length = 1448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TPKISFR 9 TPK SFR Sbjct: 257 TPKHSFR 263>XP_006712710 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TPKISFR 9 TPK SFR Sbjct: 388 TPKHSFR 394>XP_006712709 Length = 1579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TPKISFR 9 TPK SFR Sbjct: 388 TPKHSFR 394>NP_001277007 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 R+TPKI Sbjct: 200 RMTPKI 205>NP_000450 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 R+TPKI Sbjct: 347 RMTPKI 352>NP_001277006 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 R+TPKI Sbjct: 304 RMTPKI 309>NP_001020414 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 351 RLTPKL 356>NP_001020413 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 351 RLTPKL 356>NP_001560 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 351 RLTPKL 356>NP_057191 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TPKISF 8 TPKI+F Sbjct: 499 TPKINF 504>NP_056473 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 164 RLTPKL 169>NP_003747 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 168 RLTPKL 173>XP_005274725 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 RLTPK+ Sbjct: 377 RLTPKL 382>XP_005255669 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLTPKISF 8 RL P ISF Sbjct: 20 RLAPVISF 27>XP_005251620 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 R+TPKI Sbjct: 304 RMTPKI 309>XP_005251618 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTPKI 6 R+TPKI Sbjct: 347 RMTPKI 352>XP_005250685 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RLTPKISFR 9 ++ P+I+FR Sbjct: 174 KIKPRITFR 182>XP_005250684 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RLTPKISFR 9 ++ P+I+FR Sbjct: 185 KIKPRITFR 193>XP_005250683 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RLTPKISFR 9 ++ P+I+FR Sbjct: 185 KIKPRITFR 193>XP_005250682 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RLTPKISFR 9 ++ P+I+FR Sbjct: 185 KIKPRITFR 193>XP_006714540 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TPKISF 8 TPKI+F Sbjct: 455 TPKINF 460>XP_006713468 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTPKISF 8 +TPKIS+ Sbjct: 1 MTPKISW 7>XP_005265616 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTPKISF 8 +TPKIS+ Sbjct: 56 MTPKISW 62Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.145 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 685,468 Number of extensions: 804 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |