Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 18 1135 XP_006715292 18 1135 XP_006726157 17 2528 XP_005275612 17 2528 XP_005275610 17 2528 XP_006726064 17 2528 XP_005275460 17 2528 XP_006715157 17 2528 XP_005249149 17 2528 NP_002254 17 2528 NP_001273700 17 4312 NP_001183959 17 4312 NP_115593 17 4312 NP_078944 17 4312 NP_942592 17 4312 NP_060217 17 4312 NP_065741 17 4312 XP_005265730 17 4312 XP_005265729 17 4312 XP_005265728 17 4312 XP_005265724 17 4312 NP_001129673 16 7355 NP_060661 16 7355 NP_001129674 16 7355 NP_078986 16 7355 NP_056002 16 7355 NP_006706 16 7355 NP_001243424 16 7355 NP_001243425 16 7355 NP_001243423 16 7355 XP_005259322 16 7355 XP_005258982 16 7355 XP_006720571 16 7355 XP_005254441 16 7355 XP_005266498 16 7355 XP_006714020 16 7355 XP_005248200 16 7355 XP_006714019 16 7355 NP_001099040 16 7355 NP_001265 15 9605 NP_001107593 15 9605 NP_001107594 15 9605 NP_005520 15 9605 NP_937784 15 9605 NP_001171826 15 9605 NP_055922 15 9605 NP_001171825 15 9605 NP_612119 15 9605 NP_612117 15 9605 NP_001171827 15 9605 NP_612116 15 9605 XP_006724648 15 9605 XP_005262057 15 9605 XP_005262055 15 9605 XP_005262056 15 9605 XP_005262054 15 9605 XP_005262053 15 9605 XP_006718822 15 9605 XP_005245920 15 9605 XP_006710660 15 9605 XP_006710659 15 9605 XP_006710658 15 9605 XP_006710657 15 9605>NP_115927 Length = 1321 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLSTADG V Sbjct: 461 RLSTADGRV 469>XP_006715292 Length = 759 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLSTADG V Sbjct: 456 RLSTADGRV 464>XP_006726157 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>XP_005275612 Length = 633 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 178 RLSTQEGLV 186>XP_005275610 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>XP_006726064 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>XP_005275460 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>XP_006715157 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>XP_005249149 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>NP_002254 Length = 673 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RLSTADGLV 9 RLST +GLV Sbjct: 219 RLSTQEGLV 227>NP_001273700 Length = 2490 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 73 KLSTADG 79>NP_001183959 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 157 KLSTADG 163>NP_115593 Length = 2603 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>NP_078944 Length = 627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 157 KLSTADG 163>NP_942592 Length = 2352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>NP_060217 Length = 2542 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 157 KLSTADG 163>NP_065741 Length = 2617 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 157 KLSTADG 163>XP_005265730 Length = 1480 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>XP_005265729 Length = 1543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>XP_005265728 Length = 2351 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>XP_005265724 Length = 2602 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSTADG 7 +LSTADG Sbjct: 186 KLSTADG 192>NP_001129673 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTADGLV 9 LST++GL+ Sbjct: 158 LSTSEGLI 165>NP_060661 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSTADGLV 9 LST DG+V Sbjct: 89 LSTEDGVV 96>NP_001129674 Length = 135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTADGLV 9 LST++GL+ Sbjct: 88 LSTSEGLI 95>NP_078986 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTADGLV 9 LST++GL+ Sbjct: 174 LSTSEGLI 181>NP_056002 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSTADGL 8 RLS+ DGL Sbjct: 544 RLSSIDGL 551>NP_006706 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 478 RLSNTDGL 485>NP_001243424 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 478 RLSNTDGL 485>NP_001243425 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 379 RLSNTDGL 386>NP_001243423 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 478 RLSNTDGL 485>XP_005259322 Length = 151 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTADGLV 9 LST++GL+ Sbjct: 104 LSTSEGLI 111>XP_005258982 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSTADGLV 9 L TADG+V Sbjct: 122 LLTADGMV 129>XP_006720571 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 379 RLSNTDGL 386>XP_005254441 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 478 RLSNTDGL 485>XP_005266498 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSTADGLV 9 LST DG+V Sbjct: 89 LSTEDGVV 96>XP_006714020 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSTADGL 8 RLS+ DGL Sbjct: 509 RLSSIDGL 516>XP_005248200 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSTADGL 8 RLS+ DGL Sbjct: 544 RLSSIDGL 551>XP_006714019 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSTADGL 8 RLS+ DGL Sbjct: 544 RLSSIDGL 551>NP_001099040 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSTADGLV 9 L TADG+V Sbjct: 296 LLTADGMV 303>NP_001265 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 442 RLSKGDGL 449>NP_001107593 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 442 RLSKGDGL 449>NP_001107594 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 442 RLSKGDGL 449>NP_005520 Length = 4391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4235 RTSTASGLL 4243>NP_937784 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RLSTADGLV 9 +++TA+GL+ Sbjct: 549 QMATAEGLI 557>NP_001171826 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>NP_055922 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>NP_001171825 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 388 RLSTAD 393>NP_612119 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 180 RLSTAD 185>NP_612117 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 200 RLSTAD 205>NP_001171827 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>NP_612116 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 224 RLSTAD 229>XP_006724648 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 388 RLSTAD 393>XP_005262057 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 388 RLSTAD 393>XP_005262055 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>XP_005262056 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>XP_005262054 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 352 RLSTAD 357>XP_005262053 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLSTAD 6 RLSTAD Sbjct: 388 RLSTAD 393>XP_006718822 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLSTADGL 8 RLS DGL Sbjct: 442 RLSKGDGL 449>XP_005245920 Length = 4392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4236 RTSTASGLL 4244>XP_006710660 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4241 RTSTASGLL 4249>XP_006710659 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4400 RTSTASGLL 4408>XP_006710658 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4407 RTSTASGLL 4415>XP_006710657 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSTADGLV 9 R STA GL+ Sbjct: 4423 RTSTASGLL 4431Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.134 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,280 Number of extensions: 481 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |