Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 NP_001268422 19 665 NP_001268423 19 665 XP_005264328 19 665 NP_061992 17 4312 NP_004269 17 4312 NP_061761 17 4312 XP_006721659 17 4312 NP_061993 17 4312 NP_065782 16 5631 NP_001229341 16 5631 NP_055490 16 7355 XP_006726469 16 7355 XP_006713516 16 7355 XP_006711123 16 7355 XP_006711122 16 7355 XP_006711121 16 7355 XP_006711120 16 7355 XP_006711119 16 7355 NP_001158268 15 9605 NP_066008 15 9605 NP_064506 15 9605 NP_775742 15 9605 NP_005877 15 9605 NP_005489 15 9605 NP_660289 15 9605 NP_061757 15 9605 NP_061759 15 9605 NP_061760 15 9605 NP_061758 15 9605 NP_056484 15 9605 NP_061763 15 9605 XP_005259758 15 9605 XP_006721186 15 9605 XP_005255829 15 9605 XP_006721185 15 9605 XP_006721184 15 9605 XP_006718117 15 9605 XP_005269573 15 9605 XP_005269572 15 9605 XP_006713019 15 9605 NP_061762 15 9605 NP_061753 15 9605 NP_061754 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLGASDRTM 9 RLGASDR M Sbjct: 1046 RLGASDRIM 1054>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLGASDRTM 9 RLGASDR M Sbjct: 1176 RLGASDRIM 1184>NP_001268422 Length = 1058 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLGASDRTM 9 RLGASDR M Sbjct: 874 RLGASDRIM 882>NP_001268423 Length = 1058 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLGASDRTM 9 RLGASDR M Sbjct: 874 RLGASDRIM 882>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLGASDRTM 9 RLGASDR M Sbjct: 1077 RLGASDRIM 1085>NP_061992 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GASDR Sbjct: 530 RVGASDR 536>NP_004269 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLGASDRTM 9 RLGA RT+ Sbjct: 36 RLGAESRTL 44>NP_061761 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GASDR Sbjct: 529 RVGASDR 535>XP_006721659 Length = 244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLGASDRTM 9 RLGA RT+ Sbjct: 36 RLGAESRTL 44>NP_061993 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GASDR Sbjct: 531 RVGASDR 537>NP_065782 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGASDRT 8 LGASDR+ Sbjct: 577 LGASDRS 583>NP_001229341 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGASDRT 8 LGASDR+ Sbjct: 559 LGASDRS 565>NP_055490 Length = 2017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1669 RLGLSDR 1675>XP_006726469 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGASDRTM 9 +GA DRT+ Sbjct: 161 VGAEDRTL 168Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 R GASDR Sbjct: 49 RRGASDR 55>XP_006713516 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGASDRTM 9 +GA DRT+ Sbjct: 249 VGAEDRTL 256Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 R GASDR Sbjct: 137 RRGASDR 143>XP_006711123 Length = 1737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1631 RLGLSDR 1637>XP_006711122 Length = 1918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1631 RLGLSDR 1637>XP_006711121 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1597 RLGLSDR 1603>XP_006711120 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1631 RLGLSDR 1637>XP_006711119 Length = 1979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 RLG SDR Sbjct: 1631 RLGLSDR 1637>NP_001158268 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LGASDRT 8 LGA DRT Sbjct: 168 LGAYDRT 174>NP_066008 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLGASDR 7 R+GA DR Sbjct: 1402 RIGAGDR 1408>NP_775742 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LGASDRT 8 LGA DRT Sbjct: 256 LGAYDRT 262>NP_005877 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GASDRTM 9 G+SDRT+ Sbjct: 207 GSSDRTI 213>NP_005489 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLGASDRTM 9 RLG +DR + Sbjct: 211 RLGLNDRVL 219>NP_660289 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLGASDRT 8 RLG +D+T Sbjct: 97 RLGENDKT 104>NP_061757 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061759 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 532 RVGAADR 538>NP_061760 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061758 Length = 787 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>NP_056484 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 529 RVGATDR 535>NP_061763 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>XP_005259758 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLGASDRTM 9 RLG +DR + Sbjct: 211 RLGLNDRVL 219>XP_006721186 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GASDRTM 9 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_005255829 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GASDRTM 9 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_006721185 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GASDRTM 9 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_006721184 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GASDRTM 9 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_006718117 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLGASDRT 8 RLG ++RT Sbjct: 69 RLGVAERT 76>XP_005269573 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLGASDRT 8 RLG +D+T Sbjct: 97 RLGENDKT 104>XP_005269572 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLGASDRT 8 RLG +D+T Sbjct: 97 RLGENDKT 104>XP_006713019 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LGASDRT 8 LGA DRT Sbjct: 241 LGAYDRT 247>NP_061762 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 528 RVGATDR 534>NP_061753 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061754 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLGASDR 7 R+GA+DR Sbjct: 530 RVGATDR 536Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 447,829 Number of extensions: 553 Number of successful extensions: 47 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |