Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057434 20 509 NP_001245200 20 509 NP_891989 20 509 NP_000240 20 509 NP_065972 20 509 NP_891991 20 509 XP_006720224 20 509 XP_005267794 20 509 XP_005267793 20 509 XP_005267792 20 509 XP_006720223 20 509 XP_005265218 20 509 NP_057480 18 1482 XP_006720629 18 1482 XP_005254498 18 1482 XP_006720628 18 1482 NP_055838 18 1935 NP_001263181 18 1935 NP_061119 17 2528 XP_006713362 17 2528 NP_001073994 17 2528 NP_001116697 17 4312 NP_001248396 16 5631 NP_115517 16 5631 NP_000979 16 5631 NP_071351 16 7355 NP_056271 16 7355 NP_055370 16 7355 NP_001159749 16 7355 NP_001007232 16 7355 NP_055697 16 7355 NP_001159748 16 7355 NP_055299 16 7355 XP_005252939 16 7355 XP_005264733 16 7355 XP_005264732 16 7355 NP_057297 15 9605 NP_054733 15 9605 NP_004353 15 9605 NP_001124147 15 9605 NP_002323 15 9605 NP_005712 15 9605 NP_001264069 15 9605 NP_002784 15 9605 NP_078837 15 9605 NP_001139138 15 9605 NP_001139139 15 9605 NP_036333 15 9605 NP_001096654 15 9605 NP_001157931 15 9605 NP_001129610 15 9605 NP_001264242 15 9605 NP_001035225 15 9605 NP_001157930 15 9605 NP_065178 15 9605 NP_955452 15 9605 NP_036556 15 9605 XP_006724587 15 9605 XP_005274689 15 9605 XP_005254846 15 9605 XP_005266580 15 9605 XP_006719929 15 9605 XP_005250100 15 9605 XP_006716131 15 9605 XP_006716130 15 9605 XP_006716129 15 9605 XP_006716128 15 9605 XP_006716127 15 9605 XP_006714125 15 9605 XP_006713543 15 9605 XP_006711335 15 9605 XP_005273152 15 9605>NP_057434 Length = 1377 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLDETVVN 8 RLDETVVN Sbjct: 10 RLDETVVN 17>NP_891989 Length = 2046 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLDETVVN 8 RLDETVVN Sbjct: 10 RLDETVVN 17>NP_065972 Length = 2133 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>NP_891991 Length = 2090 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>XP_006720224 Length = 1276 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>XP_005267794 Length = 1379 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>XP_005267793 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 609 QLDETVVSC 617>XP_005267792 Length = 1420 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>XP_006720223 Length = 1989 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLDETVVNC 9 +LDETVV+C Sbjct: 639 QLDETVVSC 647>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RLDETVVN 8 RLDETVVN Sbjct: 10 RLDETVVN 17>NP_057480 Length = 466 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDETVVNC 9 LDET+V+C Sbjct: 294 LDETLVHC 301>XP_006720629 Length = 342 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDETVVNC 9 LDET+V+C Sbjct: 294 LDETLVHC 301>XP_005254498 Length = 466 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDETVVNC 9 LDET+V+C Sbjct: 294 LDETLVHC 301>XP_006720628 Length = 466 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDETVVNC 9 LDET+V+C Sbjct: 294 LDETLVHC 301>NP_055838 Length = 676 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DETVVNC 9 DE++VNC Sbjct: 578 DESIVNC 584>NP_001263181 Length = 677 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DETVVNC 9 DE++VNC Sbjct: 579 DESIVNC 585>NP_061119 Length = 372 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RLDETVVNC 9 +L+ET+ NC Sbjct: 289 QLEETIKNC 297>XP_006713362 Length = 118 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RLDETVVNC 9 +LD+T+V C Sbjct: 34 QLDKTIVEC 42>NP_001073994 Length = 97 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RLDETVVNC 9 +LD+T+V C Sbjct: 34 QLDKTIVEC 42>NP_001116697 Length = 88 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLDETVVNC 9 RL++ VNC Sbjct: 61 RLEDAFVNC 69>NP_001248396 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDETVVNC 9 ++ET VNC Sbjct: 206 IEETRVNC 213>NP_115517 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDETVVNC 9 ++ET VNC Sbjct: 260 IEETRVNC 267>NP_000979 Length = 136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LDETVVN 8 LD+TVVN Sbjct: 91 LDKTVVN 97>NP_071351 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LDETVVNC 9 LD+ ++NC Sbjct: 1103 LDDGLINC 1110>NP_056271 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 L ET+ NC Sbjct: 16 LKETLTNC 23>NP_055370 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE VNC Sbjct: 926 IDEARVNC 933>NP_001159749 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 121 RLDETV 126>NP_001007232 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 161 RLDETV 166>NP_055697 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 153 RLDETV 158>NP_001159748 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 154 RLDETV 159>NP_055299 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 ETVVNC 9 ETV NC Sbjct: 234 ETVTNC 239>XP_005252939 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE VNC Sbjct: 944 IDEARVNC 951>XP_005264733 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 122 RLDETV 127>XP_005264732 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDETV Sbjct: 160 RLDETV 165>NP_057297 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDET+ Sbjct: 348 RLDETI 353>NP_054733 Length = 2136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 DETVVNC 9 DE VV C Sbjct: 232 DEAVVRC 238>NP_004353 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDETVVN 8 +D+TVVN Sbjct: 243 VDQTVVN 249>NP_001124147 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDETVVN 8 +D+TVVN Sbjct: 243 VDQTVVN 249>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 DETVVNC 9 DET NC Sbjct: 1045 DETHANC 1051>NP_005712 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>NP_001264069 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 249 VDEVIQNC 256>NP_002784 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 DETVVNC 9 D+TV+ C Sbjct: 76 DKTVIGC 82>NP_078837 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDET+ Sbjct: 788 RLDETI 793>NP_001139138 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 LD+ VV C Sbjct: 653 LDDLVVEC 660>NP_001139139 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 LD+ VV C Sbjct: 664 LDDLVVEC 671>NP_036333 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 LD+ VV C Sbjct: 664 LDDLVVEC 671>NP_001096654 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLDETVVN 8 RL+ET+ N Sbjct: 538 RLEETIEN 545>NP_001157931 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 171 VDEVIQNC 178>NP_001129610 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLDETVV 7 R DETV+ Sbjct: 77 RFDETVI 83>NP_001264242 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLDETVVN 8 RL+ET+ N Sbjct: 761 RLEETIEN 768>NP_001035225 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>NP_001157930 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 171 VDEVIQNC 178>NP_065178 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>NP_955452 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 + ETV NC Sbjct: 2427 MTETVKNC 2434>NP_036556 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLDETVV 7 R DETV+ Sbjct: 89 RFDETVI 95>XP_006724587 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLDETVVN 8 ++DE V+N Sbjct: 1677 KIDEVVIN 1684>XP_005274689 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLDETVVN 8 ++DE V+N Sbjct: 1707 KIDEVVIN 1714>XP_005254846 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDET+ Sbjct: 118 RLDETI 123>XP_005266580 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDET+ Sbjct: 376 RLDETI 381>XP_006719929 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLDETV 6 RLDET+ Sbjct: 728 RLDETI 733>XP_005250100 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 270 VDEVIQNC 277>XP_006716131 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 171 VDEVIQNC 178>XP_006716130 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>XP_006716129 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>XP_006716128 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 300 VDEVIQNC 307>XP_006716127 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 +DE + NC Sbjct: 277 VDEVIQNC 284>XP_006714125 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDETVVN 8 +D+TVVN Sbjct: 243 VDQTVVN 249>XP_006713543 Length = 2591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDETVVNC 9 + ETV NC Sbjct: 2428 MTETVKNC 2435>XP_006711335 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLDETVV 7 R DETV+ Sbjct: 89 RFDETVI 95>XP_005273152 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLDETVV 7 R DETV+ Sbjct: 89 RFDETVI 95Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,060 Number of extensions: 1065 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |