Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_005893 17 3301 NP_001003652 17 3301 NP_001138576 17 3301 NP_001129409 17 3301 NP_001138574 17 3301 NP_005892 17 3301 NP_001138575 17 3301 NP_001017368 17 3301 NP_060718 17 3301 XP_006722514 17 3301 XP_005258316 17 3301 XP_006720569 17 3301 NP_001240813 17 4312 NP_060193 17 4312 NP_079420 17 4312 NP_001095876 17 4312 XP_005263305 17 4312 XP_005263304 17 4312 XP_006714389 17 4312 XP_005263303 17 4312 XP_005263302 17 4312 NP_848566 16 5631 NP_001119580 16 5631 NP_000330 16 5631 NP_001119579 16 5631 XP_005256176 16 5631 NP_683762 16 5631 NP_005891 16 7355 NP_001003688 16 7355 NP_001001419 16 7355 NP_005894 16 7355 NP_001001420 16 7355 NP_055844 16 7355 NP_005896 16 7355 NP_001120689 16 7355 NP_001139332 16 7355 NP_000951 16 7355 NP_055030 16 7355 XP_005259152 16 7355 XP_005259150 16 7355 XP_005266461 16 7355 XP_005266460 16 7355 XP_005266458 16 7355 XP_006719890 16 7355 XP_005273481 16 7355 XP_005263050 16 7355 XP_005263049 16 7355 XP_005263048 16 7355 XP_006714280 16 7355 NP_001139333 16 7355 NP_001027006 16 7355 NP_871001 16 7355 NP_001121121 15 9605 NP_060399 15 9605 NP_056207 15 9605 NP_006022 15 9605 NP_000439 15 9605 NP_054828 15 9605 NP_078788 15 9605 NP_997223 15 9605 XP_005261186 15 9605 XP_005261185 15 9605 XP_005261184 15 9605 XP_005261183 15 9605 XP_005261182 15 9605 XP_005261181 15 9605 XP_005273931 15 9605 XP_005273930 15 9605 XP_005253098 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLCILRMRF 9 RLCILRM F Sbjct: 497 RLCILRMSF 505>NP_005893 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 368 RMCTIRMSF 376>NP_001003652 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 410 RMCTIRMSF 418>NP_001138576 Length = 230 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 173 RMCTIRMSF 181>NP_001129409 Length = 437 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 380 RMCTIRMSF 388>NP_001138574 Length = 320 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 263 RMCTIRMSF 271>NP_005892 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 410 RMCTIRMSF 418>NP_001138575 Length = 381 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 324 RMCTIRMSF 332>NP_001017368 Length = 363 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 RLC+L RF Sbjct: 83 RLCLLCQRF 91>NP_060718 Length = 605 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLCILRM 7 RLCILR+ Sbjct: 512 RLCILRV 518>XP_006722514 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 410 RMCTIRMSF 418>XP_005258316 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 410 RMCTIRMSF 418>XP_006720569 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 R+C +RM F Sbjct: 316 RMCTIRMSF 324>NP_001240813 Length = 1166 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 795 RLCILR 800>NP_060193 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLCILRMR 8 R+C+LR R Sbjct: 35 RVCVLRKR 42>NP_079420 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 873 RLCILR 878>NP_001095876 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 873 RLCILR 878>XP_005263305 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 795 RLCILR 800>XP_005263304 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 795 RLCILR 800>XP_006714389 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 853 RLCILR 858>XP_005263303 Length = 1245 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 873 RLCILR 878>XP_005263302 Length = 1245 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLCILR Sbjct: 873 RLCILR 878>NP_848566 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LCILRMRF 9 LC LRM F Sbjct: 77 LCSLRMAF 84>NP_001119580 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCILRMR 8 +C++RMR Sbjct: 771 VCVMRMR 777>NP_000330 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCILRMR 8 +C++RMR Sbjct: 771 VCVMRMR 777>NP_001119579 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCILRMR 8 +C++RMR Sbjct: 770 VCVMRMR 776>XP_005256176 Length = 1020 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCILRMR 8 +C++RMR Sbjct: 770 VCVMRMR 776>NP_683762 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RLCILRMR 8 ++C+LR+R Sbjct: 28 KVCVLRVR 35>NP_005891 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_001003688 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_001001419 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_005894 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_001001420 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_055844 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCILRMR 8 LC+LR R Sbjct: 803 LCVLRSR 809>NP_005896 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 373 KMCTIRMSF 381>NP_001120689 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 410 KMCTIRMSF 418>NP_001139332 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCILRMR 8 LC+LR R Sbjct: 803 LCVLRSR 809>NP_000951 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CILRMRF 9 C LRMR+ Sbjct: 170 CFLRMRW 176>NP_055030 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 LC+ R+R+ Sbjct: 863 LCVSRLRY 870>XP_005259152 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CILRMRF 9 C LRMR+ Sbjct: 170 CFLRMRW 176>XP_005259150 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CILRMRF 9 C LRMR+ Sbjct: 170 CFLRMRW 176>XP_005266461 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 287 KMCTIRMSF 295>XP_005266460 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 324 KMCTIRMSF 332>XP_005266458 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 373 KMCTIRMSF 381>XP_006719890 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 410 KMCTIRMSF 418>XP_005273481 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLCILRM 7 RLC L+M Sbjct: 544 RLCFLKM 550>XP_005263050 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 369 KMCTIRMSF 377>XP_005263049 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>XP_005263048 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>XP_006714280 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RLCILRMRF 9 ++C +RM F Sbjct: 408 KMCTIRMSF 416>NP_001139333 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCILRMR 8 LC+LR R Sbjct: 803 LCVLRSR 809>NP_001027006 Length = 1149 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RLCILRM 7 RLC L+M Sbjct: 544 RLCFLKM 550>NP_871001 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 RLC+LR Sbjct: 189 RLCLLR 194>NP_001121121 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 LC+L +RF Sbjct: 262 LCLLVVRF 269>NP_060399 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 LC+L +RF Sbjct: 262 LCLLVVRF 269>NP_056207 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCILRMR 8 LC+ RMR Sbjct: 77 LCVPRMR 83>NP_006022 Length = 3336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3204 IAILRLRF 3211>NP_000439 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 R+CILR Sbjct: 314 RVCILR 319>NP_054828 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LCILRM 7 +C+LRM Sbjct: 1291 MCVLRM 1296>NP_078788 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LCILRM 7 +C+LRM Sbjct: 231 ICVLRM 236>NP_997223 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 R+CILR Sbjct: 114 RVCILR 119>XP_005261186 Length = 3139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3007 IAILRLRF 3014>XP_005261185 Length = 3229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3097 IAILRLRF 3104>XP_005261184 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3215 IAILRLRF 3222>XP_005261183 Length = 3268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3136 IAILRLRF 3143>XP_005261182 Length = 3346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3214 IAILRLRF 3221>XP_005261181 Length = 3347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCILRMRF 9 + ILR+RF Sbjct: 3215 IAILRLRF 3222>XP_005273931 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 R+CILR Sbjct: 114 RVCILR 119>XP_005273930 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 R+CILR Sbjct: 114 RVCILR 119>XP_005253098 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLCILR 6 R+CILR Sbjct: 314 RVCILR 319Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.370 0.167 0.591 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 548,348 Number of extensions: 678 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |