Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 869 XP_005245660 17 4312 NP_001073895 17 4312 NP_055573 16 5631 NP_001640 16 5631 XP_005274557 16 5631 XP_005271606 16 5631 XP_005271605 16 5631 XP_005271603 16 5631 XP_005271602 16 5631 NP_064592 15 9605 NP_056247 15 9605 NP_001123203 15 9605 NP_001271236 15 9605 NP_001271235 15 9605 NP_071918 15 9605 NP_001159580 15 9605 NP_057165 15 9605 NP_004738 15 9605 NP_065122 15 9605 NP_001161048 15 9605 XP_006725185 15 9605 XP_006725184 15 9605 XP_006725183 15 9605 XP_005254649 15 9605 XP_005254648 15 9605 XP_006718119 15 9605 XP_006718118 15 9605 XP_005270333 15 9605 XP_005252384 15 9605 XP_005262922 15 9605 XP_005262921 15 9605 XP_005262920 15 9605 XP_005262919 15 9605 XP_005262918 15 9605 NP_001161049 15 9605 NP_001123199 15 9605 NP_001123200 15 9605 NP_001123201 15 9605>NP_064450 Length = 1722 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLADAETES 9 RL DAETES Sbjct: 637 RLEDAETES 645>XP_005245660 Length = 1158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 ++DAETES Sbjct: 41 VSDAETES 48>NP_001073895 Length = 1158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 ++DAETES Sbjct: 41 VSDAETES 48>NP_055573 Length = 992 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 L++AETES Sbjct: 704 LSEAETES 711>NP_001640 Length = 1616 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLADAETES 9 RLA+AET + Sbjct: 12 RLAEAETRA 20>XP_005274557 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLADAETES 9 RLA+AET + Sbjct: 12 RLAEAETRA 20>XP_005271606 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 L++AETES Sbjct: 84 LSEAETES 91>XP_005271605 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 L++AETES Sbjct: 129 LSEAETES 136>XP_005271603 Length = 907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 L++AETES Sbjct: 704 LSEAETES 711>XP_005271602 Length = 915 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADAETES 9 L++AETES Sbjct: 704 LSEAETES 711>NP_064592 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLADAETES 9 RL+D+ET S Sbjct: 1318 RLSDSETLS 1326>NP_056247 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLADAE 6 RLADAE Sbjct: 551 RLADAE 556>NP_001123203 Length = 1110 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLADAE 6 RLADAE Sbjct: 470 RLADAE 475>NP_001271236 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LADAETES 9 LADA T+S Sbjct: 221 LADAATDS 228>NP_001271235 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LADAETES 9 LADA T+S Sbjct: 178 LADAATDS 185>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LADAETES 9 LADA T+S Sbjct: 993 LADAATDS 1000>NP_001159580 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>NP_057165 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>NP_004738 Length = 1919 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1604 RLADVEQE 1611>NP_065122 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLADAETE 8 RLA+ ETE Sbjct: 251 RLANIETE 258>NP_001161048 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLADAETE 8 RLA+ ETE Sbjct: 251 RLANIETE 258>XP_006725185 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1264 RLADVEQE 1271>XP_006725184 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1592 RLADVEQE 1599>XP_006725183 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1600 RLADVEQE 1607>XP_005254649 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LADAETES 9 LADA T+S Sbjct: 1016 LADAATDS 1023>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LADAETES 9 LADA T+S Sbjct: 1016 LADAATDS 1023>XP_006718119 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1264 RLADVEQE 1271>XP_006718118 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1592 RLADVEQE 1599>XP_005270333 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLADAETE 8 RLAD E E Sbjct: 1600 RLADVEQE 1607>XP_005252384 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLADAETES 9 RL+D+ET S Sbjct: 598 RLSDSETLS 606>XP_005262922 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>XP_005262921 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>XP_005262920 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>XP_005262919 Length = 1383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>XP_005262918 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LADAETE 8 +AD+ETE Sbjct: 50 IADSETE 56>NP_001161049 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLADAETE 8 RLA+ ETE Sbjct: 251 RLANIETE 258>NP_001123199 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLADAE 6 RLADAE Sbjct: 551 RLADAE 556>NP_001123200 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLADAE 6 RLADAE Sbjct: 551 RLADAE 556>NP_001123201 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RLADAE 6 RLADAE Sbjct: 551 RLADAE 556Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.109 0.250 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,039 Number of extensions: 544 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |