Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001265484 17 4312 NP_001265483 17 4312 NP_872619 17 4312 NP_006348 17 4312 XP_005250515 17 4312 XP_005250514 17 4312 XP_005246301 17 4312 NP_061877 17 4312 NP_072053 16 5631 NP_000506 16 5631 NP_001308 16 5631 NP_072050 16 5631 NP_002050 16 5631 NP_072052 16 5631 NP_072051 16 5631 XP_005257276 16 5631 XP_005257275 16 5631 XP_005264669 16 5631 XP_006712181 16 5631 XP_006712180 16 5631 NP_001309 16 5631 NP_072101 16 5631 NP_072103 16 5631 NP_072102 16 5631 NP_072170 16 5631 NP_066271 16 5631 NP_000042 16 7355 NP_056023 16 7355 NP_001190985 16 7355 NP_001077094 16 7355 NP_057276 16 7355 XP_006722380 16 7355 XP_005258153 16 7355 XP_005258152 16 7355 XP_005258151 16 7355 XP_005258150 16 7355 XP_005258149 16 7355 XP_006718908 16 7355 XP_005271621 16 7355 XP_006718907 16 7355 XP_006718906 16 7355 XP_005271619 16 7355 XP_005271618 16 7355 NP_848622 15 9605 NP_997299 15 9605 NP_001138669 15 9605 NP_002009 15 9605 NP_619646 15 9605 NP_001243193 15 9605 NP_001243194 15 9605 XP_005276416 15 9605 XP_005256615 15 9605 XP_005256613 15 9605 XP_005256612 15 9605 XP_005265371 15 9605>NP_001265484 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TQQKSNT 9 TQQK NT Sbjct: 43 TQQKKNT 49>NP_001265483 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TQQKSNT 9 TQQK NT Sbjct: 43 TQQKKNT 49>NP_872619 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TQQKSNT 9 TQQK NT Sbjct: 43 TQQKKNT 49>NP_006348 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TQQKSNT 9 TQQK NT Sbjct: 43 TQQKKNT 49>XP_005250515 Length = 1083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+Q SNT Sbjct: 432 RLTKQGSNT 440>XP_005250514 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+Q SNT Sbjct: 432 RLTKQGSNT 440>XP_005246301 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TQQKSNT 9 TQQK NT Sbjct: 43 TQQKKNT 49>NP_061877 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+Q SNT Sbjct: 432 RLTKQGSNT 440>NP_072053 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 78 TQQKSN 83>NP_000506 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_001308 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_072050 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 78 TQQKSN 83>NP_002050 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_072052 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_072051 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>XP_005257276 Length = 171 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>XP_005257275 Length = 179 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>XP_005264669 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RITQQKSNT 9 R+ QQ+ NT Sbjct: 76 RVLQQRENT 84>XP_006712181 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RITQQKSNT 9 R+ QQ+ NT Sbjct: 76 RVLQQRENT 84>XP_006712180 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RITQQKSNT 9 R+ QQ+ NT Sbjct: 76 RVLQQRENT 84>NP_001309 Length = 128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 4 TQQKSN 9>NP_072101 Length = 222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 98 TQQKSN 103>NP_072103 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 75 TQQKSN 80>NP_072102 Length = 139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 15 TQQKSN 20>NP_072170 Length = 167 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_066271 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TQQKSN 8 TQQKSN Sbjct: 93 TQQKSN 98>NP_000042 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>NP_056023 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1734 RMTRNKANT 1742>NP_001190985 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1711 RMTRNKANT 1719>NP_001077094 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1711 RMTRNKANT 1719>NP_057276 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RITQQKSNT 9 RI +QK NT Sbjct: 350 RIHRQKQNT 358>XP_006722380 Length = 1769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1441 RMTRNKANT 1449>XP_005258153 Length = 2037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1709 RMTRNKANT 1717>XP_005258152 Length = 2060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1732 RMTRNKANT 1740>XP_005258151 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1734 RMTRNKANT 1742>XP_005258150 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1734 RMTRNKANT 1742>XP_005258149 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKSNT 9 R+T+ K+NT Sbjct: 1734 RMTRNKANT 1742>XP_006718908 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 227 RITQQK 232>XP_005271621 Length = 2708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1227 RITQQK 1232>XP_006718907 Length = 3050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1569 RITQQK 1574>XP_006718906 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>XP_005271619 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>XP_005271618 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>NP_848622 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKSNT 9 +TQ+ SNT Sbjct: 1093 LTQRNSNT 1100>NP_997299 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ITQQKSN 8 +TQ KSN Sbjct: 308 VTQSKSN 314>NP_001138669 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ITQQKSN 8 +TQ KSN Sbjct: 308 VTQSKSN 314>NP_002009 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 1020 RMTQQQEN 1027>NP_619646 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ITQQKSNT 9 I+QQ SNT Sbjct: 160 ISQQYSNT 167>NP_001243193 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 1009 RMTQQQEN 1016>NP_001243194 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 965 RMTQQQEN 972>XP_005276416 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ITQQKSN 8 +TQ KSN Sbjct: 297 VTQSKSN 303>XP_005256615 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 1019 RMTQQQEN 1026>XP_005256613 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 1019 RMTQQQEN 1026>XP_005256612 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RITQQKSN 8 R+TQQ+ N Sbjct: 1020 RMTQQQEN 1027>XP_005265371 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITQQKSN 8 ITQ KSN Sbjct: 289 ITQTKSN 295Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.107 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,572 Number of extensions: 494 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |