Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000412 17 3301 XP_005257400 17 3301 NP_940852 17 4312 XP_005262137 17 4312 NP_055490 16 7355 XP_006712122 16 7355 XP_006712121 16 7355 XP_006711122 16 7355 XP_006711121 16 7355 XP_006711120 16 7355 XP_006711119 16 7355 NP_758454 15 9605 NP_002964 15 9605 NP_001035089 15 9605 NP_001171869 15 9605 NP_671735 15 9605 NP_001171872 15 9605 NP_001171874 15 9605 NP_001171870 15 9605 NP_001193937 15 9605 NP_001171871 15 9605 NP_060564 15 9605 NP_001123479 15 9605 NP_001123478 15 9605 NP_008999 15 9605 NP_001265137 15 9605 NP_002085 15 9605 NP_997263 15 9605 XP_006724176 15 9605 XP_006724175 15 9605 XP_006724174 15 9605 XP_006724173 15 9605 XP_005255332 15 9605 XP_005255331 15 9605 XP_006716803 15 9605 XP_005251459 15 9605 XP_006715557 15 9605 XP_006715555 15 9605 XP_006715554 15 9605 XP_006715553 15 9605 XP_006715552 15 9605 XP_005267054 15 9605 XP_005267053 15 9605 XP_006715551 15 9605 XP_006715550 15 9605 XP_006715549 15 9605 XP_006715548 15 9605 XP_006715547 15 9605 XP_006715546 15 9605 XP_006714181 15 9605 NP_003773 15 9605>NP_000412 Length = 584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RISARKGSL 9 RIS+ KGSL Sbjct: 35 RISSSKGSL 43>XP_005257400 Length = 624 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RISARKGSL 9 RIS+ KGSL Sbjct: 35 RISSSKGSL 43>NP_940852 Length = 268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISARKGS 8 +SARKGS Sbjct: 127 VSARKGS 133>XP_005262137 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISARKGS 8 +SARKGS Sbjct: 127 VSARKGS 133>NP_055490 Length = 2017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISARKGSL 9 R+SA KG L Sbjct: 1898 RLSAEKGRL 1906>XP_006712122 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RISARKG 7 R+SAR+G Sbjct: 790 RVSARRG 796>XP_006712121 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RISARKG 7 R+SAR+G Sbjct: 790 RVSARRG 796>XP_006711122 Length = 1918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISARKGSL 9 R+SA KG L Sbjct: 1860 RLSAEKGRL 1868>XP_006711121 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISARKGSL 9 R+SA KG L Sbjct: 1826 RLSAEKGRL 1834>XP_006711120 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISARKGSL 9 R+SA KG L Sbjct: 1860 RLSAEKGRL 1868>XP_006711119 Length = 1979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISARKGSL 9 R+SA KG L Sbjct: 1860 RLSAEKGRL 1868>NP_758454 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RISAR G Sbjct: 326 RISARSG 332>NP_002964 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RISARKGSL 9 R+SA +GS+ Sbjct: 635 RVSAGRGSI 643>NP_001035089 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1112 RISDRRGS 1119>NP_001171869 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 60 ARKGSL 65>NP_671735 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 43 ARKGSL 48>NP_001171872 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 43 ARKGSL 48>NP_001171874 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 32 ARKGSL 37>NP_001171870 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 60 ARKGSL 65>NP_001193937 Length = 1743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1095 RISDRRGS 1102>NP_001171871 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 49 ARKGSL 54>NP_060564 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 312 ISARKG 317>NP_001123479 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 183 ISARKG 188>NP_001123478 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 320 ISARKG 325>NP_008999 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 300 RISLRKG 306>NP_001265137 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 245 RISLRKG 251>NP_002085 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 321 ISARKG 326>NP_997263 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SARKGS 8 SARKGS Sbjct: 212 SARKGS 217>XP_006724176 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 231 RISLRKG 237>XP_006724175 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 245 RISLRKG 251>XP_006724174 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 286 RISLRKG 292>XP_006724173 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RIS RKG Sbjct: 300 RISLRKG 306>XP_005255332 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 213 ISARKG 218>XP_005255331 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ISARKG 7 ISARKG Sbjct: 214 ISARKG 219>XP_006716803 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 19 ARKGSL 24>XP_005251459 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARKGSL 9 ARKGSL Sbjct: 19 ARKGSL 24>XP_006715557 Length = 1744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1096 RISDRRGS 1103>XP_006715555 Length = 1638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1120 RISDRRGS 1127>XP_006715554 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1120 RISDRRGS 1127>XP_006715553 Length = 1808 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1096 RISDRRGS 1103>XP_006715552 Length = 1817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1105 RISDRRGS 1112>XP_005267054 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1113 RISDRRGS 1120>XP_005267053 Length = 1824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1112 RISDRRGS 1119>XP_006715551 Length = 1825 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1113 RISDRRGS 1120>XP_006715550 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1120 RISDRRGS 1127>XP_006715549 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1118 RISDRRGS 1125>XP_006715548 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1119 RISDRRGS 1126>XP_006715547 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1119 RISDRRGS 1126>XP_006715546 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RISARKGS 8 RIS R+GS Sbjct: 1120 RISDRRGS 1127>XP_006714181 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RISARKG 7 RISAR G Sbjct: 326 RISARSG 332>NP_003773 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISARKGSL 9 +SAR+G L Sbjct: 296 VSARRGGL 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.130 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,544 Number of extensions: 704 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |