Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_001008392 18 1135 NP_001103159 17 3301 NP_066405 17 3301 XP_005272388 17 3301 XP_005272387 17 3301 XP_005272385 17 3301 XP_005272384 17 3301 XP_006716676 17 3301 XP_006716675 17 3301 NP_071504 17 4312 NP_000911 17 4312 NP_001035806 17 4312 NP_004161 17 4312 NP_005036 17 4312 NP_774959 17 4312 XP_006718641 17 4312 XP_005274089 17 4312 XP_005274088 17 4312 XP_006718640 17 4312 NP_057576 16 5631 NP_001171272 16 5631 NP_001171273 16 5631 NP_065944 16 5631 NP_055758 16 5631 XP_005256675 16 5631 XP_005250893 16 5631 XP_005250894 16 5631 NP_001238892 16 7355 NP_001238891 16 7355 NP_056410 16 7355 XP_006725061 16 7355 XP_005245618 16 7355 NP_003657 16 7355 NP_001005198 15 9605 NP_001265354 15 9605 NP_003622 15 9605 NP_849157 15 9605 NP_009153 15 9605 NP_001017926 15 9605 NP_443124 15 9605 NP_859062 15 9605 XP_006719324 15 9605 XP_006714159 15 9605 XP_006714158 15 9605 XP_006714157 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RIAKENNQT 9 RIAKEN+QT Sbjct: 188 RIAKENDQT 196>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RIAKENNQT 9 RIAKEN+QT Sbjct: 188 RIAKENDQT 196>NP_001008392 Length = 1079 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 ++ KENNQT Sbjct: 306 KVLKENNQT 314>NP_001103159 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 148 RIDQENNET 156>NP_066405 Length = 560 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 153 RIDQENNET 161>XP_005272388 Length = 534 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 127 RIDQENNET 135>XP_005272387 Length = 539 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 132 RIDQENNET 140>XP_005272385 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 148 RIDQENNET 156>XP_005272384 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 148 RIDQENNET 156>XP_006716676 Length = 560 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 153 RIDQENNET 161>XP_006716675 Length = 560 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 RI +ENN+T Sbjct: 153 RIDQENNET 161>NP_071504 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>NP_000911 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>NP_001035806 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>NP_004161 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 R A+ENNQ Sbjct: 342 RCAEENNQ 349>NP_005036 Length = 3460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RIAKENNQT 9 RI ENN T Sbjct: 2955 RIGSENNMT 2963>NP_774959 Length = 3458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RIAKENNQT 9 RI ENN T Sbjct: 2955 RIGSENNMT 2963>XP_006718641 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>XP_005274089 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>XP_005274088 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>XP_006718640 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAKENN 7 ++AKENN Sbjct: 104 KVAKENN 110>NP_057576 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +IAKEN Q Sbjct: 110 QIAKENQQ 117>NP_001171272 Length = 146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +IAKEN Q Sbjct: 110 QIAKENQQ 117>NP_001171273 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +IAKEN Q Sbjct: 110 QIAKENQQ 117>NP_065944 Length = 1701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 ++AK N+QT Sbjct: 1132 QVAKSNSQT 1140>NP_055758 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RIAKENNQT 9 ++ K NNQT Sbjct: 142 KLIKRNNQT 150>XP_005256675 Length = 118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +IAKEN Q Sbjct: 110 QIAKENQQ 117>XP_005250893 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RIAKENNQT 9 ++ K NNQT Sbjct: 142 KLIKRNNQT 150>XP_005250894 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RIAKENNQT 9 ++ K NNQT Sbjct: 142 KLIKRNNQT 150>NP_001238892 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +I+K NNQ Sbjct: 260 KISKSNNQ 267>NP_001238891 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +I+K NNQ Sbjct: 260 KISKSNNQ 267>NP_056410 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +I+K NNQ Sbjct: 260 KISKSNNQ 267>XP_006725061 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 +I+K NNQ Sbjct: 260 KISKSNNQ 267>XP_005245618 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 R+A+E NQ Sbjct: 179 RLAREKNQ 186>NP_003657 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIAKENNQ 8 R+A+E NQ Sbjct: 179 RLAREKNQ 186>NP_001005198 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAKENNQT 9 + KENN T Sbjct: 11 LQKENNNT 18>NP_001265354 Length = 1774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RIAKENN 7 R+AKE N Sbjct: 936 RVAKEQN 942>NP_003622 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKENNQT 9 +KENN T Sbjct: 98 SKENNNT 104>NP_849157 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 +++KE+N T Sbjct: 742 KVSKEHNHT 750>NP_009153 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAKENNQT 9 + K NNQT Sbjct: 135 MVKRNNQT 142>NP_001017926 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAKENNQT 9 + K NNQT Sbjct: 135 MVKRNNQT 142>NP_443124 Length = 2459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RIAKENN 7 R+AKE N Sbjct: 1621 RVAKEQN 1627>NP_859062 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAKENNQT 9 + KE+NQT Sbjct: 104 LEKEDNQT 111>XP_006719324 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAKENNQT 9 + KE+NQT Sbjct: 104 LEKEDNQT 111>XP_006714159 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 +++KE+N T Sbjct: 742 KVSKEHNHT 750>XP_006714158 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 +++KE+N T Sbjct: 742 KVSKEHNHT 750>XP_006714157 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RIAKENNQT 9 +++KE+N T Sbjct: 742 KVSKEHNHT 750Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.112 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 615,986 Number of extensions: 866 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |