Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 XP_006715411 17 2528 NP_542781 17 2528 NP_003473 17 3301 XP_006719679 17 3301 XP_005269219 17 3301 XP_006719678 17 3301 XP_006719677 17 3301 NP_005617 17 4312 XP_006710879 17 4312 XP_006710878 17 4312 NP_612395 16 5631 NP_001122403 16 5631 XP_006714477 16 5631 NP_955352 16 7355 NP_001274371 16 7355 NP_001274368 16 7355 NP_001274372 16 7355 NP_001274366 16 7355 NP_001274369 16 7355 NP_004594 16 7355 NP_689706 16 7355 NP_001159375 16 7355 XP_005250609 16 7355 XP_005263289 16 7355 XP_006714373 16 7355 XP_005263286 16 7355 XP_005270565 16 7355 XP_005270564 16 7355 NP_008996 15 9605 NP_055062 15 9605 NP_001258867 15 9605 NP_631896 15 9605 NP_005409 15 9605 NP_998783 15 9605 NP_001401 15 9605 XP_005253141 15 9605 XP_005253140 15 9605 XP_005253138 15 9605 XP_005253137 15 9605 XP_005253136 15 9605 XP_006718348 15 9605 XP_006718347 15 9605 XP_005253134 15 9605 XP_006714485 15 9605 XP_005263418 15 9605 XP_005263417 15 9605 XP_006714484 15 9605 XP_005263416 15 9605 XP_006714483 15 9605 XP_005263415 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 907 RGRSKLKS 914>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 907 RGRSKLKS 914>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGRSKLKS Sbjct: 908 RGRSKLKS 915>XP_006715411 Length = 166 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRSKLKSL 9 RGRS+ KSL Sbjct: 82 RGRSRSKSL 90>NP_542781 Length = 261 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRSKLKSL 9 RGRS+ KSL Sbjct: 177 RGRSRSKSL 185>NP_003473 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGR++LKS Sbjct: 1324 RGRARLKS 1331>XP_006719679 Length = 5536 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGR++LKS Sbjct: 1324 RGRARLKS 1331>XP_005269219 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGR++LKS Sbjct: 1324 RGRARLKS 1331>XP_006719678 Length = 5539 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGR++LKS Sbjct: 1324 RGRARLKS 1331>XP_006719677 Length = 5540 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RGRSKLKS 8 RGR++LKS Sbjct: 1324 RGRARLKS 1331>NP_005617 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRSKLKSL 9 RGRS+ KSL Sbjct: 319 RGRSQEKSL 327>XP_006710879 Length = 371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRSKLKSL 9 RGRS+ KSL Sbjct: 196 RGRSQEKSL 204>XP_006710878 Length = 371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRSKLKSL 9 RGRS+ KSL Sbjct: 196 RGRSQEKSL 204>NP_612395 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 +GR KLKS Sbjct: 332 QGRKKLKS 339>NP_001122403 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 +GR KLKS Sbjct: 332 QGRKKLKS 339>XP_006714477 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 +GR KLKS Sbjct: 332 QGRKKLKS 339>NP_955352 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>NP_001274371 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>NP_001274368 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>NP_001274372 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>NP_001274366 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 777 RAKSKLKS 784>NP_001274369 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>NP_004594 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSKLKSL 9 RSKLKS+ Sbjct: 90 RSKLKSI 96>NP_689706 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 RGR K+K+ Sbjct: 192 RGRKKIKA 199>NP_001159375 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSKLKSL 9 RSKLKS+ Sbjct: 90 RSKLKSI 96>XP_005250609 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSKLKSL 9 RSKLKS+ Sbjct: 90 RSKLKSI 96>XP_005263289 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 789 RAKSKLKS 796>XP_006714373 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 804 RAKSKLKS 811>XP_005263286 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 R +SKLKS Sbjct: 816 RAKSKLKS 823>XP_005270565 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 RGR K+K+ Sbjct: 179 RGRKKIKA 186>XP_005270564 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGRSKLKS 8 RGR K+K+ Sbjct: 179 RGRKKIKA 186>NP_008996 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGRSKLK 7 RGR+KL+ Sbjct: 264 RGRAKLR 270>NP_055062 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 529 GRNKLKKI 536>NP_001258867 Length = 2845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGRSKLKS 8 RGR LKS Sbjct: 935 RGRGALKS 942>NP_631896 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 208 RGKKRLKKL 216>NP_005409 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>NP_998783 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>NP_001401 Length = 2778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGRSKLKS 8 RGR LKS Sbjct: 868 RGRGALKS 875>XP_005253141 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 208 RGKKRLKKL 216>XP_005253140 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 208 RGKKRLKKL 216>XP_005253138 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 658 RGKKRLKKL 666>XP_005253137 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>XP_005253136 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>XP_006718348 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>XP_006718347 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 628 RGKKRLKKL 636>XP_005253134 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGRSKLKSL 9 RG+ +LK L Sbjct: 658 RGKKRLKKL 666>XP_006714485 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 574 GRNKLKKI 581>XP_005263418 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 684 GRNKLKKI 691>XP_005263417 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 690 GRNKLKKI 697>XP_006714484 Length = 1685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 690 GRNKLKKI 697>XP_005263416 Length = 1693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 690 GRNKLKKI 697>XP_006714483 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 684 GRNKLKKI 691>XP_005263415 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSKLKSL 9 GR+KLK + Sbjct: 690 GRNKLKKI 697Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.130 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,782 Number of extensions: 486 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |