Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_002632 18 1482 NP_862825 18 1935 NP_055104 17 4312 NP_653191 17 4312 NP_036558 16 5631 NP_006617 16 5631 NP_660330 16 7355 NP_060860 16 7355 NP_115518 16 7355 NP_597707 16 7355 NP_001229858 16 7355 XP_006724930 16 7355 XP_006724929 16 7355 XP_006724928 16 7355 XP_006724509 16 7355 XP_006724508 16 7355 XP_006724507 16 7355 XP_006722394 16 7355 XP_005258167 16 7355 XP_006722393 16 7355 XP_006722392 16 7355 XP_006722391 16 7355 XP_006722390 16 7355 XP_005258166 16 7355 XP_006722389 16 7355 XP_005258165 16 7355 XP_005258164 16 7355 XP_006722362 16 7355 XP_006720908 16 7355 XP_005255176 16 7355 NP_001155048 15 9605 NP_056404 15 9605 NP_689957 15 9605 NP_001157284 15 9605 NP_068602 15 9605 NP_057315 15 9605 NP_003265 15 9605 NP_078788 15 9605 NP_524145 15 9605 NP_006827 15 9605 NP_065975 15 9605 XP_006724110 15 9605 XP_005261226 15 9605 XP_006724109 15 9605 XP_005261225 15 9605 XP_005258045 15 9605 XP_006715707 15 9605 XP_005249672 15 9605 XP_006715706 15 9605 XP_006715705 15 9605 XP_005249670 15 9605 XP_006713395 15 9605 NP_612472 15 9605 NP_001791 15 9605 NP_612454 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4864 RGHKIIIS 4871>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4880 RGHKIIIS 4887>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4881 RGHKIIIS 4888>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4912 RGHKIIIS 4919>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4932 RGHKIIIS 4939>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4935 RGHKIIIS 4942>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4935 RGHKIIIS 4942>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4935 RGHKIIIS 4942>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHKIIIS Sbjct: 4936 RGHKIIIS 4943>NP_002632 Length = 484 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RGHKIII 7 RGHK+II Sbjct: 63 RGHKVII 69>NP_862825 Length = 459 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 RGHK+I++ Sbjct: 45 RGHKVILA 52>NP_055104 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GHKIIIS 8 GHK+I+S Sbjct: 395 GHKVIMS 401>NP_653191 Length = 191 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGHKIIISF 9 RGH I+SF Sbjct: 50 RGHVRIVSF 58>NP_036558 Length = 1217 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GHKIIIS 8 GH++I+S Sbjct: 997 GHRVIVS 1003>NP_006617 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGHKIIIS 8 +GHK+I++ Sbjct: 45 QGHKVILA 52>NP_660330 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGHKII 6 +GHKII Sbjct: 253 KGHKII 258>NP_060860 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>NP_115518 Length = 2537 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1708 HEVIVSF 1714>NP_597707 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GHKIIISF 9 GH+II+ + Sbjct: 180 GHEIIVQY 187>NP_001229858 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GHKIIISF 9 GH+II+ + Sbjct: 73 GHEIIVQY 80>XP_006724930 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006724929 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006724928 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006724509 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006724508 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006724507 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGHKIIISF 9 RG ++I+S+ Sbjct: 194 RGQQVIVSY 202>XP_006722394 Length = 1845 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1015 HEVIVSF 1021>XP_005258167 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1026 HEVIVSF 1032>XP_006722393 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1369 HEVIVSF 1375>XP_006722392 Length = 2444 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1614 HEVIVSF 1620>XP_006722391 Length = 2448 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1618 HEVIVSF 1624>XP_006722390 Length = 2467 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1638 HEVIVSF 1644>XP_005258166 Length = 2468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1638 HEVIVSF 1644>XP_006722389 Length = 2506 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1708 HEVIVSF 1714>XP_005258165 Length = 2534 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1704 HEVIVSF 1710>XP_005258164 Length = 2538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 HKIIISF 9 H++I+SF Sbjct: 1708 HEVIVSF 1714>XP_006722362 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGHKII 6 +GHKII Sbjct: 256 KGHKII 261>XP_006720908 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GHKIIISF 9 GH+II+ + Sbjct: 180 GHEIIVQY 187>XP_005255176 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GHKIIISF 9 GH+II+ + Sbjct: 51 GHEIIVQY 58>NP_001155048 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKIIIS 8 HKI+IS Sbjct: 283 HKIVIS 288>NP_056404 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKIIIS 8 HKI+IS Sbjct: 371 HKIVIS 376>NP_689957 Length = 2213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GHKII S Sbjct: 229 GHKIIPS 235>NP_001157284 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HKIIISF 9 HK I+SF Sbjct: 364 HKSIVSF 370>NP_068602 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HKIIISF 9 HK I+SF Sbjct: 364 HKSIVSF 370>NP_057315 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKIIIS 8 HKII+S Sbjct: 227 HKIIVS 232>NP_003265 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHKI++ Sbjct: 575 GHKIVL 580>NP_078788 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHK+++ Sbjct: 2 GHKVVV 7>NP_524145 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GHKIIISF 9 GH ++SF Sbjct: 118 GHTAVVSF 125>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GH+III Sbjct: 2148 GHRIII 2153>NP_065975 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RGHKIIIS 8 +GHKI+ + Sbjct: 45 QGHKIVFA 52>XP_006724110 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHKI++ Sbjct: 575 GHKIVL 580>XP_005261226 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHKI++ Sbjct: 286 GHKIVL 291>XP_006724109 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHKI++ Sbjct: 575 GHKIVL 580>XP_005261225 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHKI++ Sbjct: 575 GHKIVL 580>XP_005258045 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKIIIS 8 HKII+S Sbjct: 227 HKIIVS 232>XP_006715707 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 255 GHTVIIS 261>XP_005249672 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 255 GHTVIIS 261>XP_006715706 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 255 GHTVIIS 261>XP_006715705 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 273 GHTVIIS 279>XP_005249670 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 467 GHTVIIS 473>XP_006713395 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 2 GHKIII 7 GHK+++ Sbjct: 2 GHKVVV 7>NP_612472 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RGHKIIISF 9 R H +++SF Sbjct: 44 RWHNLLVSF 52>NP_001791 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GHKIIISF 9 GH ++SF Sbjct: 118 GHTAVVSF 125>NP_612454 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GHKIIIS 8 GH +IIS Sbjct: 255 GHTVIIS 261Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.158 0.478 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,492 Number of extensions: 755 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |