Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_001243199 17 2528 NP_015556 17 2528 NP_001243198 17 2528 NP_005836 17 4312 NP_113620 17 4312 NP_001129426 17 4312 NP_001248379 17 4312 NP_001248380 17 4312 XP_005254082 17 4312 XP_006719977 17 4312 XP_005272282 17 4312 XP_005272281 17 4312 NP_002232 16 7355 NP_006280 16 7355 NP_055872 16 7355 NP_001258733 16 7355 NP_002616 16 7355 NP_659444 16 7355 NP_008890 16 7355 NP_001258734 16 7355 XP_005262071 16 7355 XP_006723416 16 7355 XP_006723415 16 7355 XP_006723414 16 7355 XP_005258689 16 7355 XP_006719852 16 7355 XP_005266357 16 7355 XP_006719851 16 7355 XP_006719850 16 7355 XP_006719849 16 7355 XP_006719848 16 7355 XP_005266356 16 7355 XP_006719847 16 7355 XP_006719846 16 7355 XP_006719845 16 7355 XP_006719844 16 7355 XP_006719843 16 7355 XP_006719842 16 7355 XP_005251759 16 7355 XP_005251758 16 7355 XP_006716915 16 7355 XP_005251621 16 7355 NP_689633 16 7355 NP_001138985 15 9605 NP_055581 15 9605 NP_066268 15 9605 NP_001138944 15 9605 NP_115635 15 9605 NP_001138987 15 9605 NP_001138986 15 9605 NP_001138945 15 9605 NP_653213 15 9605 XP_006722454 15 9605 XP_006722453 15 9605 XP_006722452 15 9605 XP_006722451 15 9605 XP_006722450 15 9605 XP_006722449 15 9605 XP_006722448 15 9605 XP_006722447 15 9605 XP_006719238 15 9605 XP_005249975 15 9605 XP_006710296 15 9605 NP_001166600 15 9605 NP_056525 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1456 RFFLDIASD 1464>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1477 RFFLDIASD 1485>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1487 RFFLDIASD 1495>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1487 RFFLDIASD 1495>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1487 RFFLDIASD 1495>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1456 RFFLDIASD 1464>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1466 RFFLDIASD 1474>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1487 RFFLDIASD 1495>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1474 RFFLDIASD 1482>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1477 RFFLDIASD 1485>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 RFFLD ASD Sbjct: 1487 RFFLDIASD 1495>NP_001243199 Length = 597 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFFLDTAS 8 RF+LDT S Sbjct: 282 RFYLDTVS 289>NP_015556 Length = 665 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFFLDTAS 8 RF+LDT S Sbjct: 350 RFYLDTVS 357>NP_001243198 Length = 597 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFFLDTAS 8 RF+LDT S Sbjct: 282 RFYLDTVS 289>NP_005836 Length = 1325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 R+FL+T+ D Sbjct: 880 RYFLETSRD 888>NP_113620 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 155 RLFVDTDSD 163>NP_001129426 Length = 201 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 155 RLFVDTDSD 163>NP_001248379 Length = 268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 146 RLFVDTDSD 154>NP_001248380 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 160 RLFVDTDSD 168>XP_005254082 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 R+FL+T+ D Sbjct: 837 RYFLETSRD 845>XP_006719977 Length = 1295 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFLDTASD 9 R+FL+T+ D Sbjct: 850 RYFLETSRD 858>XP_005272282 Length = 254 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 132 RLFVDTDSD 140>XP_005272281 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 R F+DT SD Sbjct: 169 RLFVDTDSD 177>NP_002232 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F +DTASD Sbjct: 238 FQVDTASD 245>NP_006280 Length = 2541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LDTASD 9 LDTASD Sbjct: 1152 LDTASD 1157>NP_055872 Length = 4678 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>NP_001258733 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 +FLD +SD Sbjct: 381 YFLDKSSD 388>NP_002616 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 +FLD +SD Sbjct: 403 YFLDKSSD 410>NP_659444 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 +FF D +SD Sbjct: 119 KFFRDVSSD 127>NP_008890 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RFFLDTAS 8 +FF+DT++ Sbjct: 421 KFFMDTST 428>NP_001258734 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 +FLD +SD Sbjct: 338 YFLDKSSD 345>XP_005262071 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 +FLD +SD Sbjct: 380 YFLDKSSD 387>XP_006723416 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RFFLDTAS 8 +FF+DT++ Sbjct: 272 KFFMDTST 279>XP_006723415 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RFFLDTAS 8 +FF+DT++ Sbjct: 423 KFFMDTST 430>XP_006723414 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RFFLDTAS 8 +FF+DT++ Sbjct: 423 KFFMDTST 430>XP_005258689 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RFFLDTASD 9 +FF D +SD Sbjct: 20 KFFRDVSSD 28>XP_006719852 Length = 4752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_005266357 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719851 Length = 4689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719850 Length = 4697 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719849 Length = 4703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719848 Length = 4737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_005266356 Length = 4755 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719847 Length = 4761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2083 FSLETASD 2090>XP_006719846 Length = 4763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719845 Length = 4772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719844 Length = 4789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719843 Length = 4794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_006719842 Length = 4797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFLDTASD 9 F L+TASD Sbjct: 2119 FSLETASD 2126>XP_005251759 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FFLDTA 7 FF+DTA Sbjct: 234 FFIDTA 239>XP_005251758 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FFLDTA 7 FF+DTA Sbjct: 244 FFIDTA 249>XP_006716915 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LDTASD 9 LDTASD Sbjct: 1152 LDTASD 1157>XP_005251621 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LDTASD 9 LDTASD Sbjct: 1152 LDTASD 1157>NP_689633 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FFLDTA 7 FF+DTA Sbjct: 313 FFIDTA 318>NP_001138985 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FFL TAS Sbjct: 271 FFLTTAS 277>NP_055581 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FFL TAS Sbjct: 271 FFLTTAS 277>NP_066268 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RFFLDTA 7 +FF+DT+ Sbjct: 258 KFFIDTS 264>NP_001138944 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1094 RFFLET 1099>NP_115635 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RFFLDTA 7 R+F+DTA Sbjct: 410 RWFVDTA 416>NP_001138987 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FFL TAS Sbjct: 203 FFLTTAS 209>NP_001138986 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FFL TAS Sbjct: 291 FFLTTAS 297>NP_001138945 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 444 RFFLET 449>NP_653213 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 2143 RFFLET 2148>XP_006722454 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1076 RFFLET 1081>XP_006722453 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1094 RFFLET 1099>XP_006722452 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1094 RFFLET 1099>XP_006722451 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1138 RFFLET 1143>XP_006722450 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1236 RFFLET 1241>XP_006722449 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1236 RFFLET 1241>XP_006722448 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1236 RFFLET 1241>XP_006722447 Length = 1933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 1865 RFFLET 1870>XP_006719238 Length = 141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 +FFLDT Sbjct: 45 QFFLDT 50>XP_005249975 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FFL TAS Sbjct: 271 FFLTTAS 277>XP_006710296 Length = 141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 +FFLDT Sbjct: 45 QFFLDT 50>NP_001166600 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFFLDT 6 RFFL+T Sbjct: 444 RFFLET 449>NP_056525 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFLDTAS 8 FF+DT S Sbjct: 87 FFVDTGS 93Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.143 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 392,581 Number of extensions: 493 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |