Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 509 NP_079410 17 3301 NP_001004311 17 3301 XP_005256233 17 3301 XP_005256232 17 3301 XP_005256231 17 3301 XP_005256229 17 3301 XP_005256228 17 3301 XP_005256227 17 3301 XP_006721346 17 3301 XP_005256226 17 3301 XP_006721345 17 3301 XP_006721344 17 3301 XP_006721343 17 3301 XP_005256225 17 3301 XP_006710237 17 3301 NP_001234926 17 4312 NP_002947 17 4312 NP_065928 17 4312 NP_937883 17 4312 XP_005256527 17 4312 XP_006719618 17 4312 XP_006719617 17 4312 XP_006719616 17 4312 XP_006719615 17 4312 XP_006719614 17 4312 XP_005253652 17 4312 XP_005253651 17 4312 XP_005253650 17 4312 NP_003615 16 5631 NP_015561 16 5631 NP_060050 16 5631 NP_015559 16 5631 NP_002263 16 5631 XP_005259721 16 5631 XP_005269983 16 5631 XP_005269982 16 5631 XP_006717970 16 5631 NP_001263309 16 7355 NP_057733 16 7355 NP_659492 16 7355 NP_001008240 16 7355 NP_004632 15 9605 NP_002462 15 9605 NP_001182555 15 9605 NP_006735 15 9605 NP_000248 15 9605 NP_065935 15 9605 NP_064612 15 9605 XP_005261469 15 9605 XP_006723903 15 9605 XP_006723902 15 9605 XP_005256332 15 9605 XP_005267754 15 9605 XP_005267753 15 9605 XP_005267752 15 9605 XP_006720215 15 9605 XP_006720214 15 9605 XP_005267751 15 9605 XP_005270080 15 9605 XP_005252668 15 9605 XP_006717572 15 9605 XP_005252667 15 9605 XP_005252666 15 9605 XP_005252665 15 9605 XP_005252663 15 9605 XP_005252662 15 9605 NP_848544 15 9605 NP_055107 15 9605>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RER RLLNR Sbjct: 696 RERARLLNR 704>NP_079410 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2543 ERVQLINR 2550>NP_001004311 Length = 219 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RER++ LNR Sbjct: 75 RERIKNLNR 83>XP_005256233 Length = 2391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2053 ERVQLINR 2060>XP_005256232 Length = 2424 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2086 ERVQLINR 2093>XP_005256231 Length = 2573 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256229 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2543 ERVQLINR 2550>XP_005256228 Length = 2882 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2544 ERVQLINR 2551>XP_005256227 Length = 2897 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2559 ERVQLINR 2566>XP_006721346 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256226 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721345 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721344 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721343 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256225 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ERVRLLNR 9 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006710237 Length = 274 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 ERVRLL R Sbjct: 51 ERVRLLER 58>NP_001234926 Length = 1438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>NP_002947 Length = 1427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>NP_065928 Length = 4427 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RERVRLLNR 9 +ER+RLL++ Sbjct: 698 KERIRLLDK 706>NP_937883 Length = 1392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_005256527 Length = 4427 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RERVRLLNR 9 +ER+RLL++ Sbjct: 698 KERIRLLDK 706>XP_006719618 Length = 1394 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_006719617 Length = 1401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_006719616 Length = 1405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_006719615 Length = 1429 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_006719614 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_005253652 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_005253651 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>XP_005253650 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 RE+V LLN+ Sbjct: 422 REKVELLNQ 430>NP_003615 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 R+RV+L+N Sbjct: 262 RDRVKLIN 269>NP_015561 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 R+RV+L+N Sbjct: 267 RDRVKLIN 274>NP_060050 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 + VRLLNR Sbjct: 298 DEVRLLNR 305>NP_015559 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 R+RV+L+N Sbjct: 199 RDRVKLIN 206>NP_002263 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 RE+++LLN Sbjct: 138 REQIKLLN 145>XP_005259721 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 R+RV+L+N Sbjct: 194 RDRVKLIN 201>XP_005269983 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 + VRLLNR Sbjct: 298 DEVRLLNR 305>XP_005269982 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 + VRLLNR Sbjct: 324 DEVRLLNR 331>XP_006717970 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 + VRLLNR Sbjct: 324 DEVRLLNR 331>NP_001263309 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 ER+ +LNR Sbjct: 517 ERITMLNR 524>NP_057733 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 ER+ +LNR Sbjct: 517 ERITMLNR 524>NP_659492 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 +ER+RLL + Sbjct: 180 KERIRLLRQ 188>NP_001008240 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 +ER+RLL + Sbjct: 180 KERIRLLRQ 188>NP_004632 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 784 KERLQLLN 791>NP_002462 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 721 RQRYRILN 728>NP_001182555 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 768 KERLQLLN 775>NP_006735 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVRLLN 8 RVRLLN Sbjct: 78 RVRLLN 83>NP_000248 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 719 RQRYRILN 726>NP_065935 Length = 1983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 768 RQRYRILN 775>NP_064612 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 +ER +LLN+ Sbjct: 457 KERSKLLNK 465>XP_005261469 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 E VR++NR Sbjct: 137 ETVRIINR 144>XP_006723903 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 768 RQRYRILN 775>XP_006723902 Length = 1787 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 566 RQRYRILN 573>XP_005256332 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RERVRLLNR 9 +ER +LLN+ Sbjct: 308 KERSKLLNK 316>XP_005267754 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 719 RQRYRILN 726>XP_005267753 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 719 RQRYRILN 726>XP_005267752 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 761 RQRYRILN 768>XP_006720215 Length = 1968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 750 RQRYRILN 757>XP_006720214 Length = 1978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 760 RQRYRILN 767>XP_005267751 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RERVRLLN 8 R+R R+LN Sbjct: 761 RQRYRILN 768>XP_005270080 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVRLLN 8 RVRLLN Sbjct: 142 RVRLLN 147>XP_005252668 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 539 KERLQLLN 546>XP_006717572 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 784 KERLQLLN 791>XP_005252667 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 752 KERLQLLN 759>XP_005252666 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 757 KERLQLLN 764>XP_005252665 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 768 KERLQLLN 775>XP_005252663 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 784 KERLQLLN 791>XP_005252662 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RERVRLLN 8 +ER++LLN Sbjct: 784 KERLQLLN 791>NP_848544 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RERVRLL 7 RER RLL Sbjct: 72 RERARLL 78>NP_055107 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVRLLNR 9 E VR++NR Sbjct: 155 ETVRIINR 162Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.150 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,448 Number of extensions: 766 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |