Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006715945 18 1482 XP_006715944 18 1482 NP_001267724 18 1482 NP_001267723 18 1482 NP_004436 18 1482 NP_004251 18 1935 NP_004091 17 2528 NP_742103 17 2528 NP_742101 17 2528 NP_004345 17 2528 NP_003588 17 2528 NP_001171187 17 2528 NP_001171189 17 2528 XP_006715436 17 2528 XP_005266910 17 2528 XP_005266909 17 2528 XP_005266908 17 2528 XP_005266907 17 2528 XP_005246236 17 2528 NP_055535 17 3301 XP_005270358 17 3301 NP_002302 17 4312 NP_039269 17 4312 XP_006721959 17 4312 XP_005258028 17 4312 XP_005258027 17 4312 NP_002412 16 5631 NP_001139410 16 5631 NP_001003841 16 5631 NP_001607 16 5631 NP_060386 16 5631 NP_060251 16 5631 NP_001265509 16 5631 NP_001265508 16 5631 XP_005249849 16 5631 NP_001137461 16 7355 XP_005271201 16 7355 XP_006710441 16 7355 XP_005270554 16 7355 NP_001137459 16 7355 NP_001137460 16 7355 NP_055558 15 9605 NP_001094060 15 9605 NP_004123 15 9605 NP_006749 15 9605 NP_001171131 15 9605 NP_060134 15 9605 NP_002198 15 9605 NP_065754 15 9605 NP_001041445 15 9605 NP_005551 15 9605 XP_006726862 15 9605 XP_006723991 15 9605 XP_006723861 15 9605 XP_006723860 15 9605 XP_006723859 15 9605 XP_005271769 15 9605 XP_005248098 15 9605 XP_006713998 15 9605 XP_006713997 15 9605>XP_006715945 Length = 1022 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDVAQ Sbjct: 976 CTFSDVAQ 983>XP_006715944 Length = 1022 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDVAQ Sbjct: 976 CTFSDVAQ 983>NP_001267724 Length = 729 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDVAQ Sbjct: 683 CTFSDVAQ 690>NP_001267723 Length = 729 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDVAQ Sbjct: 683 CTFSDVAQ 690>NP_004436 Length = 1022 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDVAQ Sbjct: 976 CTFSDVAQ 983>NP_004251 Length = 1208 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCTASDVAQ 9 R TASDVAQ Sbjct: 646 RRTASDVAQ 654>NP_004091 Length = 639 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>NP_742103 Length = 639 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>NP_742101 Length = 616 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>NP_004345 Length = 344 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 +CTASD+ Sbjct: 132 KCTASDI 138>NP_003588 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CTA+DV Q Sbjct: 133 CTATDVLQ 140>NP_001171187 Length = 495 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CTA+DV Q Sbjct: 116 CTATDVLQ 123>NP_001171189 Length = 495 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CTA+DV Q Sbjct: 116 CTATDVLQ 123>XP_006715436 Length = 585 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>XP_005266910 Length = 616 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>XP_005266909 Length = 620 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>XP_005266908 Length = 645 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>XP_005266907 Length = 645 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CT SDV+Q Sbjct: 16 CTESDVSQ 23>XP_005246236 Length = 495 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 CTA+DV Q Sbjct: 116 CTATDVLQ 123>NP_055535 Length = 1235 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C A+DVAQ Sbjct: 552 CEAADVAQ 559>XP_005270358 Length = 1204 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C A+DVAQ Sbjct: 552 CEAADVAQ 559>NP_002302 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 RCTA+D+ Sbjct: 403 RCTANDL 409>NP_039269 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 RCTA+D+ Sbjct: 403 RCTANDL 409>XP_006721959 Length = 958 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 RCTA+D+ Sbjct: 412 RCTANDL 418>XP_005258028 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 RCTA+D+ Sbjct: 403 RCTANDL 409>XP_005258027 Length = 1018 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RCTASDV 7 RCTA+D+ Sbjct: 412 RCTANDL 418>NP_002412 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RCTASDVAQ 9 RC DVAQ Sbjct: 91 RCGVPDVAQ 99>NP_001139410 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RCTASDVAQ 9 RC DVAQ Sbjct: 25 RCGVPDVAQ 33>NP_001003841 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RCTASDVA 8 RC ASD A Sbjct: 366 RCNASDPA 373>NP_001607 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RCTASD 6 RCTA+D Sbjct: 400 RCTAAD 405>NP_060386 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CTASDVA 8 CTA DVA Sbjct: 117 CTAYDVA 123>NP_060251 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RCTASD 6 RCTA+D Sbjct: 366 RCTAAD 371>NP_001265509 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RCTASD 6 RCTA+D Sbjct: 292 RCTAAD 297>NP_001265508 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RCTASD 6 RCTA+D Sbjct: 400 RCTAAD 405>XP_005249849 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RCTASD 6 RCTA+D Sbjct: 366 RCTAAD 371>NP_001137461 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 303 CSAQDVAR 310>XP_005271201 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 380 CSAQDVAR 387>XP_006710441 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 292 CSAQDVAR 299>XP_005270554 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 380 CSAQDVAR 387>NP_001137459 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 332 CSAQDVAR 339>NP_001137460 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTASDVAQ 9 C+A DVA+ Sbjct: 303 CSAQDVAR 310>NP_055558 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCTASDV 7 +C ASDV Sbjct: 960 QCAASDV 966>NP_001094060 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCTASDV 7 +C ASDV Sbjct: 960 QCAASDV 966>NP_004123 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTASDVA 8 C+A DVA Sbjct: 276 CSAQDVA 282>NP_006749 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 RCTASDV 7 RC SDV Sbjct: 66 RCAVSDV 72>NP_001171131 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTASDVA 8 C+A DVA Sbjct: 250 CSAQDVA 256>NP_060134 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TASDVAQ 9 TA+D+AQ Sbjct: 160 TAADIAQ 166>NP_002198 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASDVAQ 9 RCT D+A+ Sbjct: 96 RCTELDMAR 104>NP_065754 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RCTASDVAQ 9 RC D+AQ Sbjct: 151 RCAFDDMAQ 159>NP_001041445 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTASDVA 8 C+A DVA Sbjct: 353 CSAQDVA 359>NP_005551 Length = 3695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 CTASDV 7 CT SDV Sbjct: 1090 CTGSDV 1095>XP_006726862 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 RCTASDV 7 RC SDV Sbjct: 66 RCAVSDV 72>XP_006723991 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 RCTASDV 7 RC SDV Sbjct: 66 RCAVSDV 72>XP_006723861 Length = 2300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 CTASDV 7 CT SDV Sbjct: 1090 CTGSDV 1095>XP_006723860 Length = 2586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 CTASDV 7 CT SDV Sbjct: 1090 CTGSDV 1095>XP_006723859 Length = 3700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 CTASDV 7 CT SDV Sbjct: 1090 CTGSDV 1095>XP_005271769 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 RCTASD 6 RC ASD Sbjct: 19 RCVASD 24>XP_005248098 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCTASDV 7 +C ASDV Sbjct: 851 QCAASDV 857>XP_006713998 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCTASDV 7 +C ASDV Sbjct: 960 QCAASDV 966>XP_006713997 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCTASDV 7 +C ASDV Sbjct: 960 QCAASDV 966Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.116 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,112 Number of extensions: 447 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |