Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004733 17 4312 NP_001028229 17 4312 NP_056335 17 4312 NP_064594 17 4312 XP_005265631 17 4312 XP_006713477 17 4312 XP_006713476 17 4312 XP_005265628 17 4312 XP_005265627 17 4312 XP_006713475 17 4312 XP_006713474 17 4312 XP_005265625 17 4312 XP_006713473 17 4312 XP_005265623 17 4312 XP_005265622 17 4312 XP_005265621 17 4312 XP_005265620 17 4312 XP_006713472 17 4312 XP_006713471 17 4312 XP_006713470 17 4312 NP_079467 16 5631 XP_005245556 16 5631 NP_694950 16 7355 NP_001121775 16 7355 NP_061159 16 7355 NP_004201 16 7355 XP_006720683 16 7355 XP_005254625 16 7355 XP_005254624 16 7355 XP_006719830 16 7355 XP_006719829 16 7355 XP_005266318 16 7355 XP_005270327 16 7355 XP_005270326 16 7355 NP_631899 16 7355 NP_001070710 16 7355 NP_689846 15 9605 NP_001018123 15 9605 NP_001159921 15 9605 NP_001258152 15 9605 NP_002209 15 9605 NP_001092093 15 9605 NP_055782 15 9605 XP_006725604 15 9605 XP_006725603 15 9605 XP_006725602 15 9605 XP_006725601 15 9605 XP_006725600 15 9605 XP_005254293 15 9605 XP_005254289 15 9605 XP_005254292 15 9605 XP_005254291 15 9605 XP_005254290 15 9605 XP_006711891 15 9605 XP_006711888 15 9605 XP_006711887 15 9605 XP_005273364 15 9605 XP_005273362 15 9605 XP_005273361 15 9605 XP_006711886 15 9605 XP_006711885 15 9605 XP_005273359 15 9605 XP_006711884 15 9605 XP_005273357 15 9605 XP_005273356 15 9605 XP_005273358 15 9605 XP_005273355 15 9605 XP_005273353 15 9605 XP_005273352 15 9605 XP_005273354 15 9605 XP_005273349 15 9605 XP_006711883 15 9605 XP_005273350 15 9605 XP_005273351 15 9605 XP_006711882 15 9605 XP_005273348 15 9605 XP_005273346 15 9605 XP_005273347 15 9605 XP_005273345 15 9605 XP_005273344 15 9605>NP_004733 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>NP_001028229 Length = 1462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>NP_056335 Length = 1287 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>NP_064594 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R VQL D+P Sbjct: 139 RGVQLYDTP 147>XP_005265631 Length = 1288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>XP_006713477 Length = 1290 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>XP_006713476 Length = 1375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 551 RVKQIVDSP 559>XP_005265628 Length = 1395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>XP_005265627 Length = 1425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>XP_006713475 Length = 1463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>XP_006713474 Length = 1465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>XP_005265625 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 655 RVKQIVDSP 663>XP_006713473 Length = 1479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 655 RVKQIVDSP 663>XP_005265623 Length = 1479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>XP_005265622 Length = 1481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>XP_005265621 Length = 1491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 667 RVKQIVDSP 675>XP_005265620 Length = 1492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>XP_006713472 Length = 1492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 668 RVKQIVDSP 676>XP_006713471 Length = 1492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 668 RVKQIVDSP 676>XP_006713470 Length = 1493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R Q+VDSP Sbjct: 669 RVKQIVDSP 677>NP_079467 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 RAVQ+V P Sbjct: 648 RAVQIVSHP 656>XP_005245556 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 RAVQ+V P Sbjct: 649 RAVQIVSHP 657>NP_694950 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQLVDSP 9 VQL DSP Sbjct: 361 VQLFDSP 367>NP_001121775 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQLVDSP 9 VQL DSP Sbjct: 361 VQLFDSP 367>NP_061159 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RAVQLVDSP 9 R +QL D P Sbjct: 876 RGIQLYDGP 884>NP_004201 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAVQLVDS 8 R VQL+DS Sbjct: 211 RGVQLLDS 218>XP_006720683 Length = 804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RAVQLVDSP 9 R +QL D P Sbjct: 319 RGIQLYDGP 327>XP_005254625 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RAVQLVDSP 9 R +QL D P Sbjct: 876 RGIQLYDGP 884>XP_005254624 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RAVQLVDSP 9 R +QL D P Sbjct: 876 RGIQLYDGP 884>XP_006719830 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQLVDSP 9 VQL DSP Sbjct: 361 VQLFDSP 367>XP_006719829 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQLVDSP 9 VQL DSP Sbjct: 361 VQLFDSP 367>XP_005266318 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQLVDSP 9 VQL DSP Sbjct: 361 VQLFDSP 367>XP_005270327 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAVQLVDS 8 R VQL+DS Sbjct: 136 RGVQLLDS 143>XP_005270326 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAVQLVDS 8 R VQL+DS Sbjct: 194 RGVQLLDS 201>NP_631899 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R +QLVD P Sbjct: 201 RLLQLVDLP 209>NP_001070710 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVQLVDSP 9 R +QLVD P Sbjct: 210 RLLQLVDLP 218>NP_689846 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 AVQL+DS Sbjct: 286 AVQLMDS 292>NP_001018123 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 AVQL+DS Sbjct: 286 AVQLMDS 292>NP_001159921 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 AVQL+DS Sbjct: 359 AVQLLDS 365>NP_001258152 Length = 8923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7351 SVQLVDS 7357>NP_002209 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 AVQL+DS Sbjct: 359 AVQLLDS 365>NP_001092093 Length = 7968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 6394 SVQLVDS 6400>NP_055782 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006725604 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006725603 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006725602 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006725601 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006725600 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_005254293 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_005254289 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_005254292 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_005254291 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_005254290 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAVQLVDSP 9 RAV+L +SP Sbjct: 749 RAVRLRESP 757>XP_006711891 Length = 8925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7351 SVQLVDS 7357>XP_006711888 Length = 8059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 6485 SVQLVDS 6491>XP_006711887 Length = 8499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 6925 SVQLVDS 6931>XP_005273364 Length = 8653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7079 SVQLVDS 7085>XP_005273362 Length = 8675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7101 SVQLVDS 7107>XP_005273361 Length = 8763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7189 SVQLVDS 7195>XP_006711886 Length = 8833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7259 SVQLVDS 7265>XP_006711885 Length = 8835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7261 SVQLVDS 7267>XP_005273359 Length = 8843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7269 SVQLVDS 7275>XP_006711884 Length = 8847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7273 SVQLVDS 7279>XP_005273357 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273356 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273358 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273355 Length = 8924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7350 SVQLVDS 7356>XP_005273353 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273352 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273354 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273349 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_006711883 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_005273350 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_005273351 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_006711882 Length = 8977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7403 SVQLVDS 7409>XP_005273348 Length = 9015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7441 SVQLVDS 7447>XP_005273346 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273347 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273345 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273344 Length = 9027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVQLVDS 8 +VQLVDS Sbjct: 7453 SVQLVDS 7459Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.131 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,204 Number of extensions: 388 Number of successful extensions: 80 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |