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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_115927                                                              19     665
NP_001004758                                                           17    3301
NP_000681                                                              16    5631
NP_000683                                                              16    5631
NP_001074318                                                           15    9605
NP_001273538                                                           15    9605
NP_115507                                                              15    9605
NP_006471                                                              15    9605
NP_001258709                                                           15    9605
NP_055629                                                              15    9605
NP_001258708                                                           15    9605
NP_001258710                                                           15    9605
XP_006715637                                                           15    9605
XP_005267214                                                           15    9605
XP_005267213                                                           15    9605
XP_006715636                                                           15    9605
XP_005267212                                                           15    9605
XP_005267211                                                           15    9605
XP_005265851                                                           15    9605
XP_006713494                                                           15    9605
XP_005265676                                                           15    9605
XP_005265675                                                           15    9605

>NP_115927
          Length = 1321

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   RARLLNRVQ 9
           RARLLNRV+
Sbjct: 698 RARLLNRVR 706



>NP_001004758
          Length = 323

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RARLLNRVQ 9
           R R+LNR+Q
Sbjct: 307 RKRILNRLQ 315



>NP_000681
          Length = 517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RARLLNRV 8
           R RLLNR+
Sbjct: 101 RGRLLNRL 108



>NP_000683
          Length = 517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RARLLNRV 8
           R RLLNR+
Sbjct: 101 RGRLLNRL 108



>NP_001074318
          Length = 178

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  RLLNRVQ 9
          RLL+RVQ
Sbjct: 11 RLLSRVQ 17



>NP_001273538
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 682 QLLNRIQ 688



>NP_115507
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 847 QLLNRIQ 853



>NP_006471
          Length = 566

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 504 LLNRVQ 509



>NP_001258709
          Length = 351

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 338 LLNRVQ 343



>NP_055629
          Length = 389

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 376 LLNRVQ 381



>NP_001258708
          Length = 442

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 429 LLNRVQ 434



>NP_001258710
          Length = 350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 337 LLNRVQ 342



>XP_006715637
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 682 QLLNRIQ 688



>XP_005267214
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 682 QLLNRIQ 688



>XP_005267213
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 847 QLLNRIQ 853



>XP_006715636
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 847 QLLNRIQ 853



>XP_005267212
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 847 QLLNRIQ 853



>XP_005267211
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RLLNRVQ 9
           +LLNR+Q
Sbjct: 847 QLLNRIQ 853



>XP_005265851
          Length = 567

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 505 LLNRVQ 510



>XP_006713494
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 327 LLNRVQ 332



>XP_005265676
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 327 LLNRVQ 332



>XP_005265675
          Length = 410

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   LLNRVQ 9
           LLNRVQ
Sbjct: 397 LLNRVQ 402



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.339    0.142    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 330,622
Number of extensions: 468
Number of successful extensions: 22
Number of sequences better than 10000.0: 22
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 22
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)