Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 XP_005266703 19 665 NP_996803 17 3301 NP_060774 16 5631 NP_001009555 16 5631 NP_001122396 16 5631 NP_001230278 16 5631 XP_006714166 16 5631 XP_006714165 16 5631 XP_005262824 16 5631 XP_006714164 16 5631 XP_006714163 16 5631 XP_006714162 16 5631 XP_006714161 16 5631 XP_006714160 16 5631 XP_005262823 16 5631 NP_001122395 16 5631 NP_001180263 16 7355 NP_001002292 16 7355 NP_004960 16 7355 NP_079187 16 7355 NP_001159418 16 7355 NP_001032412 16 7355 NP_001099007 16 7355 XP_005269823 16 7355 XP_006712793 16 7355 NP_060719 15 9605 NP_001258968 15 9605 NP_001011649 15 9605 NP_065194 15 9605 NP_001110 15 9605 NP_054908 15 9605 NP_001274420 15 9605 NP_055994 15 9605 NP_037530 15 9605 NP_001608 15 9605 NP_056065 15 9605 NP_001185731 15 9605 NP_001185730 15 9605 NP_006381 15 9605 NP_001171983 15 9605 NP_003751 15 9605 NP_001003800 15 9605 NP_001078 15 9605 XP_005259278 15 9605 XP_006717248 15 9605 XP_006717247 15 9605 XP_006717246 15 9605 XP_006717245 15 9605 XP_006717244 15 9605 XP_006717243 15 9605 XP_006717242 15 9605 XP_005247992 15 9605 XP_005247991 15 9605 XP_005247990 15 9605 XP_005246382 15 9605 XP_005264244 15 9605 NP_001177924 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RAPVLLKK 8 RAPVLLKK Sbjct: 1784 RAPVLLKK 1791>XP_005266703 Length = 1501 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RAPVLLKK 8 RAPVLLKK Sbjct: 1115 RAPVLLKK 1122>NP_996803 Length = 1137 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RAPVLLKK 8 RAPVLL++ Sbjct: 369 RAPVLLRR 376>NP_060774 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 APVLLKK 8 APVLL+K Sbjct: 201 APVLLRK 207>NP_001009555 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>NP_001122396 Length = 731 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>NP_001230278 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>XP_006714166 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 422 PLLLKKS 428>XP_006714165 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>XP_005262824 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>XP_006714164 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 363 PLLLKKS 369>XP_006714163 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 363 PLLLKKS 369>XP_006714162 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 363 PLLLKKS 369>XP_006714161 Length = 1020 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 372 PLLLKKS 378>XP_006714160 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 422 PLLLKKS 428>XP_005262823 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 422 PLLLKKS 428>NP_001122395 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 P+LLKKS Sbjct: 142 PLLLKKS 148>NP_001180263 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R PVLL+K Sbjct: 170 RPPVLLEK 177>NP_001002292 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R PVLL+K Sbjct: 259 RPPVLLEK 266>NP_004960 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 + P+LLKK Sbjct: 637 KQPILLKK 644>NP_079187 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R PVLL+K Sbjct: 261 RPPVLLEK 268>NP_001159418 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 + P+LLKK Sbjct: 82 KQPILLKK 89>NP_001032412 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R PVLL+K Sbjct: 259 RRPVLLQK 266>NP_001099007 Length = 1687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAPVLLKKS 9 + PVLL+K+ Sbjct: 888 KCPVLLRKN 896>XP_005269823 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 + P+LLKK Sbjct: 637 KQPILLKK 644>XP_006712793 Length = 1887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAPVLLKKS 9 + PVLL+K+ Sbjct: 1088 KCPVLLRKN 1096>NP_060719 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 937 RLPILIKPS 945>NP_001258968 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 707 RLPILIKPS 715>NP_001011649 Length = 1814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 937 RLPILIKPS 945>NP_065194 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVLLKKS 9 PVL+K+S Sbjct: 1481 PVLMKRS 1487>NP_001110 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 723 RTPSFLKKS 731>NP_054908 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 754 RTPSFLKKS 762>NP_001274420 Length = 1795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+ +KKS Sbjct: 604 RKPIQIKKS 612>NP_055994 Length = 1297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 APVLLKK 8 +PVL+KK Sbjct: 180 SPVLIKK 186>NP_037530 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RAPVLLK 7 RAP LLK Sbjct: 467 RAPCLLK 473>NP_001608 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 710 RTPSFLKKS 718>NP_056065 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R+P+LL K Sbjct: 581 RSPILLPK 588>NP_001185731 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RAPVLLK 7 R P+LLK Sbjct: 1498 RVPILLK 1504>NP_001185730 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RAPVLLK 7 R P+LLK Sbjct: 1528 RVPILLK 1534>NP_006381 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APVLLKKS 9 A +LLKKS Sbjct: 441 AEILLKKS 448>NP_001171983 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 710 RTPSFLKKS 718>NP_003751 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RAPVLLK 7 R P+LLK Sbjct: 1492 RVPILLK 1498>NP_001003800 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAPVLLKK 8 R+P+LL K Sbjct: 581 RSPILLPK 588>NP_001078 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RAPVLL 6 RAPVLL Sbjct: 185 RAPVLL 190>XP_005259278 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RAPVLLK 7 RAP LLK Sbjct: 467 RAPCLLK 473>XP_006717248 Length = 1664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 708 RLPILIKPS 716>XP_006717247 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 708 RLPILIKPS 716>XP_006717246 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 937 RLPILIKPS 945>XP_006717245 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 905 RLPILIKPS 913>XP_006717244 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 905 RLPILIKPS 913>XP_006717243 Length = 1889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 927 RLPILIKPS 935>XP_006717242 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+L+K S Sbjct: 936 RLPILIKPS 944>XP_005247992 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 754 RTPSFLKKS 762>XP_005247991 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 785 RTPSFLKKS 793>XP_005247990 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAPVLLKKS 9 R P LKKS Sbjct: 785 RTPSFLKKS 793>XP_005246382 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RAPVLL 6 RAPVLL Sbjct: 186 RAPVLL 191>XP_005264244 Length = 1795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAPVLLKKS 9 R P+ +KKS Sbjct: 604 RKPIQIKKS 612>NP_001177924 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APVLLKKS 9 A +LLKKS Sbjct: 236 AEILLKKS 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.131 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 693,826 Number of extensions: 1123 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |