Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_055448 17 3301 NP_001108451 16 5631 NP_001108454 16 5631 NP_003713 16 5631 NP_001108450 16 5631 NP_001108452 16 5631 NP_001108453 16 5631 NP_001191121 16 5631 NP_001119713 16 5631 NP_001191117 16 5631 NP_001119712 16 5631 NP_001119714 16 5631 NP_005418 16 5631 NP_001191116 16 5631 NP_001191115 16 5631 NP_001191119 16 5631 NP_001263627 16 5631 NP_001191113 16 5631 NP_001263628 16 5631 NP_001191118 16 5631 NP_001191120 16 5631 NP_001191114 16 5631 NP_001263626 16 5631 XP_005247903 16 5631 XP_005247901 16 5631 XP_005247900 16 5631 NP_061923 16 7355 XP_005263135 16 7355 XP_005263134 16 7355 XP_006714303 16 7355 XP_005263133 16 7355 XP_005263132 16 7355 XP_005263131 16 7355 XP_005263130 16 7355 NP_001013758 15 9605 XP_005250117 15 9605 NP_003583 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 158 RAMAIYKQS 166>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 119 RAMAIYKQS 127>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 158 RAMAIYKQS 166>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 158 RAMAIYKQS 166>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 119 RAMAIYKQS 127>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 119 RAMAIYKQS 127>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 119 RAMAIYKQS 127>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 158 RAMAIYKQS 166>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 119 RAMAIYKQS 127>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 26 RAMAIYKQS 34>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 26 RAMAIYKQS 34>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM IYKQS Sbjct: 26 RAMAIYKQS 34>NP_055448 Length = 1173 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAMTIYKQ 8 RA+ IYKQ Sbjct: 631 RALAIYKQ 638>NP_001108451 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 226 RAMPVYKKA 234>NP_001108454 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 132 RAMPVYKKA 140>NP_003713 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 226 RAMPVYKKA 234>NP_001108450 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 226 RAMPVYKKA 234>NP_001108452 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 132 RAMPVYKKA 140>NP_001108453 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 132 RAMPVYKKA 140>NP_001191121 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 105 RAMPVYKKA 113>NP_001119713 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_001191117 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001119712 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_001119714 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_005418 Length = 636 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001191116 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001191115 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001191119 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_001263627 Length = 182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MTIYKQS 9 M IYKQS Sbjct: 1 MAIYKQS 7>NP_001191113 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001263628 Length = 187 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MTIYKQS 9 M IYKQS Sbjct: 1 MAIYKQS 7>NP_001191118 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_001191120 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 127 RAMPVYKKA 135>NP_001191114 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 176 RAMPVYKKA 184>NP_001263626 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MTIYKQS 9 M IYKQS Sbjct: 1 MAIYKQS 7>XP_005247903 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 226 RAMPVYKKA 234>XP_005247901 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 209 RAMPVYKKA 217>XP_005247900 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMTIYKQS 9 RAM +YK++ Sbjct: 226 RAMPVYKKA 234>NP_061923 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_005263135 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_005263134 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_006714303 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 40 AMTLYEQ 46>XP_005263133 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_005263132 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_005263131 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>XP_005263130 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMTIYKQ 8 AMT+Y+Q Sbjct: 156 AMTLYEQ 162>NP_001013758 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RAMTIYK 7 RAM +YK Sbjct: 1017 RAMQVYK 1023>XP_005250117 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MTIYKQS 9 +T+YK+S Sbjct: 225 LTVYKES 231>NP_003583 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MTIYKQS 9 +T+YK+S Sbjct: 225 LTVYKES 231Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.120 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,467 Number of extensions: 393 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |