Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_001008844 16 7355 NP_004406 16 7355 NP_055448 16 7355 NP_004534 15 9605 NP_001269609 15 9605 NP_006166 15 9605 NP_001258137 15 9605 NP_001248392 15 9605 NP_001269608 15 9605 NP_001269610 15 9605 NP_932326 15 9605 NP_001157980 15 9605 NP_001157979 15 9605 NP_742024 15 9605 XP_006726435 15 9605 XP_005276248 15 9605 XP_003960174 15 9605 XP_005269924 15 9605 XP_005269922 15 9605 XP_006717933 15 9605 XP_005269921 15 9605 XP_005251961 15 9605 XP_006717107 15 9605 XP_006717106 15 9605 XP_006717105 15 9605 XP_005251958 15 9605 XP_006713834 15 9605 XP_006713833 15 9605 XP_006713832 15 9605 XP_006713831 15 9605 XP_005246674 15 9605 XP_005246673 15 9605 XP_005246672 15 9605 XP_005246670 15 9605 XP_005246669 15 9605 XP_005246668 15 9605 XP_005246667 15 9605 XP_005246665 15 9605 XP_006712605 15 9605 XP_006712604 15 9605 XP_005246663 15 9605 XP_005246660 15 9605 XP_005246661 15 9605 XP_005246659 15 9605 XP_005246658 15 9605 XP_005246657 15 9605 XP_005246656 15 9605 XP_005246655 15 9605 XP_005246654 15 9605 XP_005246653 15 9605 XP_005246652 15 9605 XP_005246649 15 9605 XP_005246651 15 9605 XP_005246650 15 9605 XP_005246648 15 9605 XP_005246647 15 9605 XP_006711782 15 9605 XP_005245759 15 9605 XP_003846539 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 158 RAMAIYKQS 166>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 119 RAMAIYKQS 127>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 158 RAMAIYKQS 166>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 158 RAMAIYKQS 166>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 119 RAMAIYKQS 127>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 119 RAMAIYKQS 127>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 119 RAMAIYKQS 127>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 158 RAMAIYKQS 166>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 119 RAMAIYKQS 127>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 26 RAMAIYKQS 34>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 26 RAMAIYKQS 34>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RAMA YKQS Sbjct: 26 RAMAIYKQS 34>NP_001008844 Length = 2272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 464 RALCDYKQ 471>NP_004406 Length = 2871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 464 RALCDYKQ 471>NP_055448 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+A YKQ Sbjct: 631 RALAIYKQ 638>NP_004534 Length = 6669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_001269609 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1049 AMANYEST 1056>NP_006166 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 442 ANYRQS 447>NP_001258137 Length = 8560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_001248392 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 477 ANYRQS 482>NP_001269608 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1049 AMANYEST 1056>NP_001269610 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1028 AMANYEST 1035>NP_932326 Length = 1730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 477 ANYRQS 482>NP_001157980 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_001157979 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_742024 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 83 RALRDYKQ 90>XP_006726435 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 127 RALADYRTS 135>XP_005276248 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 77 RALADYRTS 85>XP_003960174 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 152 RALADYRTS 160>XP_005269924 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 477 ANYRQS 482>XP_005269922 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 477 ANYRQS 482>XP_006717933 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 477 ANYRQS 482>XP_005269921 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 442 ANYRQS 447>XP_005251961 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1022 AMANYEST 1029>XP_006717107 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1028 AMANYEST 1035>XP_006717106 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1049 AMANYEST 1056>XP_006717105 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1049 AMANYEST 1056>XP_005251958 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMANYKQS 9 AMANY+ + Sbjct: 1049 AMANYEST 1056>XP_006713834 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 63 RALRDYKQ 70>XP_006713833 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 114 RALRDYKQ 121>XP_006713832 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 85 RALRDYKQ 92>XP_006713831 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAMANYKQ 8 RA+ +YKQ Sbjct: 114 RALRDYKQ 121>XP_005246674 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246673 Length = 8018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246672 Length = 8277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246670 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246669 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246668 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246667 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246665 Length = 8339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_006712605 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_006712604 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246663 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246660 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246661 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246659 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246658 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246657 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246656 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246655 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246654 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246653 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246652 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246649 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246651 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246650 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246648 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246647 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANYKQS 9 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_006711782 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 127 RALADYRTS 135>XP_005245759 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 77 RALADYRTS 85>XP_003846539 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAMANYKQS 9 RA+A+Y+ S Sbjct: 152 RALADYRTS 160Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.110 0.281 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,878 Number of extensions: 383 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |