Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 20 509 NP_958439 20 509 NP_958440 20 509 NP_005219 20 509 NP_000910 18 1482 XP_006714702 18 1482 XP_006714698 18 1482 XP_006714696 18 1482 XP_006714695 18 1482 XP_006726843 18 1935 XP_006726842 18 1935 XP_006726841 18 1935 XP_005259508 18 1935 XP_006723586 18 1935 XP_006723585 18 1935 XP_006710113 18 1935 XP_003960942 18 1935 XP_006710112 18 1935 XP_005275906 18 1935 NP_000535 17 4312 NP_061313 17 4312 NP_001276972 17 4312 NP_071913 16 7355 NP_001008744 16 7355 NP_060789 16 7355 NP_653328 16 7355 XP_006723533 16 7355 XP_006723532 16 7355 XP_005259458 16 7355 XP_006720264 16 7355 XP_006720263 16 7355 XP_006720262 16 7355 XP_006720261 16 7355 XP_005267905 16 7355 XP_005267904 16 7355 XP_006720260 16 7355 NP_612383 16 7355 NP_005769 15 9605 NP_001243224 15 9605 NP_055129 15 9605 NP_005230 15 9605 NP_689914 15 9605 NP_057078 15 9605 NP_149107 15 9605 XP_005260992 15 9605 XP_005256420 15 9605 XP_005256419 15 9605 XP_005256417 15 9605 XP_005256416 15 9605 XP_005256415 15 9605 XP_005256414 15 9605 XP_005256413 15 9605 XP_005256412 15 9605 XP_005256411 15 9605 XP_005256410 15 9605 XP_005256409 15 9605 XP_005256408 15 9605 XP_005256407 15 9605 XP_005268266 15 9605 XP_006720366 15 9605 XP_005268265 15 9605 XP_005253535 15 9605 XP_006712983 15 9605 XP_006712982 15 9605 XP_006712981 15 9605 XP_006712980 15 9605 NP_997657 15 9605 NP_004118 15 9605 NP_002622 15 9605>NP_958441 Length = 705 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 RA GADSYE Sbjct: 309 RACGADSYE 317>NP_958439 Length = 628 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 RA GADSYE Sbjct: 309 RACGADSYE 317>NP_958440 Length = 405 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 RA GADSYE Sbjct: 309 RACGADSYE 317>NP_005219 Length = 1210 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 RA GADSYE Sbjct: 309 RACGADSYE 317>NP_000910 Length = 974 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 RAFGADS 7 RAFGADS Sbjct: 893 RAFGADS 899>XP_006714702 Length = 867 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 RAFGADS 7 RAFGADS Sbjct: 786 RAFGADS 792>XP_006714698 Length = 973 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 RAFGADS 7 RAFGADS Sbjct: 892 RAFGADS 898>XP_006714696 Length = 974 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 RAFGADS 7 RAFGADS Sbjct: 893 RAFGADS 899>XP_006714695 Length = 974 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 RAFGADS 7 RAFGADS Sbjct: 893 RAFGADS 899>XP_006726843 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006726842 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006726841 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_005259508 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006723586 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006723585 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006710113 Length = 742 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 665 KAFGRDSY 672>XP_003960942 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_006710112 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>XP_005275906 Length = 718 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DSY Sbjct: 641 KAFGRDSY 648>NP_000535 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 R+FGA+ +E Sbjct: 343 RSFGAEEHE 351>NP_061313 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 R+FGA+ +E Sbjct: 343 RSFGAEEHE 351>NP_001276972 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 R+FGA+ +E Sbjct: 343 RSFGAEEHE 351>NP_071913 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RAFGADSY 8 RAF DSY Sbjct: 176 RAFHQDSY 183>NP_001008744 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>NP_060789 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>NP_653328 Length = 182 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RAFGADSYE 9 R+FGA+ ++ Sbjct: 144 RSFGAEDFQ 152>XP_006723533 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DS+ Sbjct: 782 KAFGRDSH 789>XP_006723532 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DS+ Sbjct: 586 KAFGRDSH 593>XP_005259458 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DS+ Sbjct: 782 KAFGRDSH 789>XP_006720264 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 282 AFGLDSFK 289>XP_006720263 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 282 AFGLDSFK 289>XP_006720262 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 282 AFGLDSFK 289>XP_006720261 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>XP_005267905 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>XP_005267904 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>XP_006720260 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFGADSYE 9 AFG DS++ Sbjct: 547 AFGLDSFK 554>NP_612383 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAFGADSY 8 +AFG DS+ Sbjct: 782 KAFGRDSH 789>NP_005769 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADSY+ Sbjct: 795 GADSYK 800>NP_001243224 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADS+E Sbjct: 422 GADSFE 427>NP_055129 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R FG YE Sbjct: 502 REFGTQKYE 510>NP_005230 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADS+E Sbjct: 282 GADSFE 287>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FGADSY 8 FG DSY Sbjct: 4640 FGIDSY 4645>NP_057078 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GADSYE 9 G DSYE Sbjct: 115 GTDSYE 120>NP_149107 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AFGADSY 8 AFG+D Y Sbjct: 449 AFGSDYY 455>XP_005260992 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADS+E Sbjct: 282 GADSFE 287>XP_005256420 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 84 RTFNVDMYE 92>XP_005256419 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 68 RTFNVDMYE 76>XP_005256417 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 84 RTFNVDMYE 92>XP_005256416 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 84 RTFNVDMYE 92>XP_005256415 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256414 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256413 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256412 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256411 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 151 RTFNVDMYE 159>XP_005256410 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256409 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005256408 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 151 RTFNVDMYE 159>XP_005256407 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 152 RTFNVDMYE 160>XP_005268266 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AFGADSY 8 AFG+D Y Sbjct: 331 AFGSDYY 337>XP_006720366 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AFGADSY 8 AFG+D Y Sbjct: 449 AFGSDYY 455>XP_005268265 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AFGADSY 8 AFG+D Y Sbjct: 449 AFGSDYY 455>XP_005253535 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RAFGADSY 8 R FG +SY Sbjct: 554 RVFGKNSY 561>XP_006712983 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADSY+ Sbjct: 548 GADSYK 553>XP_006712982 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADSY+ Sbjct: 548 GADSYK 553>XP_006712981 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADSY+ Sbjct: 548 GADSYK 553>XP_006712980 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GADSYE 9 GADSY+ Sbjct: 736 GADSYK 741>NP_997657 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 124 RTFNVDMYE 132>NP_004118 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 RAFGADSYE 9 R F D YE Sbjct: 84 RTFNVDMYE 92>NP_002622 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FGADSYE 9 FGA +YE Sbjct: 450 FGAHTYE 456Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.133 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 598,815 Number of extensions: 1277 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |