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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004295                                                              20     509
NP_996844                                                              19     665
XP_005254439                                                           19     665
XP_006720568                                                           19     665
XP_005254438                                                           19     665
NP_002335                                                              19     665
NP_001244211                                                           17    3301
NP_078807                                                              17    3301
NP_001240744                                                           17    3301
NP_001240745                                                           17    3301
NP_001244210                                                           17    3301
NP_689596                                                              17    3301
NP_001098047                                                           17    3301
NP_060456                                                              17    3301
XP_005256766                                                           17    3301
XP_006716723                                                           17    3301
XP_006716722                                                           17    3301
XP_006716721                                                           17    3301
NP_000085                                                              16    5631
NP_071373                                                              16    7355
XP_005266015                                                           16    7355
NP_150597                                                              16    7355
NP_056110                                                              15    9605
NP_056537                                                              15    9605
NP_036423                                                              15    9605
XP_005258159                                                           15    9605
XP_006722384                                                           15    9605
XP_006719768                                                           15    9605
XP_005252742                                                           15    9605

>NP_004295
          Length = 1620

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    QVVVKTLPE 9
            QV VKTLPE
Sbjct: 1146 QVAVKTLPE 1154



>NP_996844
          Length = 803

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QVVVKTLPE 9
           QV +KTLPE
Sbjct: 479 QVAIKTLPE 487



>XP_005254439
          Length = 475

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QVVVKTLPE 9
           QV +KTLPE
Sbjct: 151 QVAIKTLPE 159



>XP_006720568
          Length = 771

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QVVVKTLPE 9
           QV +KTLPE
Sbjct: 447 QVAIKTLPE 455



>XP_005254438
          Length = 819

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QVVVKTLPE 9
           QV +KTLPE
Sbjct: 495 QVAIKTLPE 503



>NP_002335
          Length = 864

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QVVVKTLPE 9
           QV +KTLPE
Sbjct: 540 QVAIKTLPE 548



>NP_001244211
          Length = 249

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   VVVKTLPE 9
           VVVK LPE
Sbjct: 111 VVVKLLPE 118



>NP_078807
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>NP_001240744
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>NP_001240745
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>NP_001244210
          Length = 603

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   VVVKTLPE 9
           VVVK LPE
Sbjct: 111 VVVKLLPE 118



>NP_689596
          Length = 885

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   VVVKTLPE 9
           VVVK LPE
Sbjct: 111 VVVKLLPE 118



>NP_001098047
          Length = 448

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKDLPE 43



>NP_060456
          Length = 448

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKDLPE 43



>XP_005256766
          Length = 350

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKDLPE 43



>XP_006716723
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>XP_006716722
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>XP_006716721
          Length = 445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  VVVKTLPE 9
          VVVK LPE
Sbjct: 36 VVVKELPE 43



>NP_000085
          Length = 2944

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VVVKTLPE 9
           VVV+T PE
Sbjct: 767 VVVRTAPE 774



>NP_071373
          Length = 594

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VVVKTLP 8
           +V+KTLP
Sbjct: 278 LVIKTLP 284



>XP_005266015
          Length = 594

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VVVKTLP 8
           +V+KTLP
Sbjct: 278 LVIKTLP 284



>NP_150597
          Length = 103

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3  VVKTLPE 9
          ++KTLP+
Sbjct: 76 IIKTLPQ 82



>NP_056110
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    QVVVKTLP 8
            QV+V+ LP
Sbjct: 1478 QVIVEVLP 1485



>NP_056537
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QVVVKTLPE 9
          QVV+KT  E
Sbjct: 45 QVVIKTQTE 53



>NP_036423
          Length = 2120

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    QVVVKTLPE 9
            QVV+K  PE
Sbjct: 1185 QVVLKGCPE 1193



>XP_005258159
          Length = 1817

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    QVVVKTLP 8
            QV+V+ LP
Sbjct: 1290 QVIVEVLP 1297



>XP_006722384
          Length = 1877

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    QVVVKTLP 8
            QV+V+ LP
Sbjct: 1350 QVIVEVLP 1357



>XP_006719768
          Length = 2120

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    QVVVKTLPE 9
            QVV+K  PE
Sbjct: 1185 QVVLKGCPE 1193



>XP_005252742
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QVVVKTLPE 9
          QVV+KT  E
Sbjct: 45 QVVIKTQTE 53



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.312    0.130    0.335 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 524,606
Number of extensions: 733
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)