Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 390 NP_689804 17 2528 NP_001273173 17 2528 NP_001273172 17 2528 XP_006719326 17 2528 XP_006719325 17 2528 NP_055858 17 4312 NP_942568 17 4312 NP_001005489 17 4312 NP_061756 17 4312 NP_000087 16 5631 NP_055320 16 5631 NP_057160 16 5631 XP_006713565 16 5631 XP_006713564 16 5631 XP_006713563 16 5631 XP_006713562 16 5631 NP_058431 16 7355 NP_005179 16 7355 NP_005896 16 7355 NP_001120689 16 7355 XP_005266461 16 7355 XP_005266460 16 7355 XP_005266458 16 7355 XP_006719890 16 7355 NP_689644 16 7355 NP_001238831 15 9605 NP_003976 15 9605 NP_001124430 15 9605 NP_001103132 15 9605 NP_001436 15 9605 NP_002820 15 9605 NP_001138840 15 9605 XP_006717854 15 9605 XP_006717263 15 9605 XP_006717262 15 9605 XP_006717261 15 9605 XP_006717260 15 9605 XP_006714893 15 9605 XP_006714892 15 9605 XP_006714891 15 9605 NP_001035532 15 9605>NP_005350 Length = 552 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QVGETFKV 8 QVGETFKV Sbjct: 334 QVGETFKV 341>NP_689804 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 Q+GET KVT Sbjct: 431 QLGETGKVT 439>NP_001273173 Length = 484 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 Q+GET KVT Sbjct: 352 QLGETGKVT 360>NP_001273172 Length = 523 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 Q+GET KVT Sbjct: 391 QLGETGKVT 399>XP_006719326 Length = 539 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 Q+GET KVT Sbjct: 431 QLGETGKVT 439>XP_006719325 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 Q+GET KVT Sbjct: 431 QLGETGKVT 439>NP_055858 Length = 1233 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGETFKV 8 +GETFK+ Sbjct: 234 IGETFKL 240>NP_942568 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGETFKV 8 +GETFK+ Sbjct: 234 IGETFKL 240>NP_001005489 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QVGETFKVT 9 Q+G+TF+++ Sbjct: 157 QIGDTFRLS 165>NP_061756 Length = 798 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QVGETFKV 8 ++G+TFK+ Sbjct: 288 EIGKTFKI 295>NP_000087 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VG+T +VT Sbjct: 456 EVGDTIRVT 464>NP_055320 Length = 210 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QVGETFKVT 9 Q+GE F+ T Sbjct: 61 QIGEVFECT 69>NP_057160 Length = 194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVGETFK 7 ++GETFK Sbjct: 62 ELGETFK 68>XP_006713565 Length = 901 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VG+T +VT Sbjct: 456 EVGDTIRVT 464>XP_006713564 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VG+T +VT Sbjct: 456 EVGDTIRVT 464>XP_006713563 Length = 1069 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VG+T +VT Sbjct: 456 EVGDTIRVT 464>XP_006713562 Length = 1090 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VG+T +VT Sbjct: 456 EVGDTIRVT 464>NP_058431 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVGETFKVT 9 +VGE KVT Sbjct: 259 EVGELVKVT 267>NP_005179 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GETFKVT 9 G+TF++T Sbjct: 176 GDTFRIT 182>NP_005896 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 247 RVGETFQAS 255>NP_001120689 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 284 RVGETFQAS 292>XP_005266461 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 161 RVGETFQAS 169>XP_005266460 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 198 RVGETFQAS 206>XP_005266458 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 247 RVGETFQAS 255>XP_006719890 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVGETFKVT 9 +VGETF+ + Sbjct: 284 RVGETFQAS 292>NP_689644 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVGETFKVT 9 Q GET K+T Sbjct: 180 QRGETIKMT 188>NP_001238831 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QVGETFKV 8 Q G TFKV Sbjct: 425 QNGRTFKV 432>NP_003976 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QVGETFKV 8 Q G TFKV Sbjct: 420 QNGRTFKV 427>NP_001124430 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 126 GKTFKAT 132>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGETFK 7 +GETFK Sbjct: 1232 MGETFK 1237>NP_001436 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 77 GKTFKAT 83>NP_002820 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 39 VVQTFKVT 46>NP_001138840 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006717854 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VGETFKV 8 VGE FKV Sbjct: 2831 VGEGFKV 2837>XP_006717263 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 56 VVQTFKVT 63>XP_006717262 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006717261 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006717260 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGETFKVT 9 V +TFKVT Sbjct: 50 VVQTFKVT 57>XP_006714893 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 77 GKTFKAT 83>XP_006714892 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 98 GKTFKAT 104>XP_006714891 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 126 GKTFKAT 132>NP_001035532 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GETFKVT 9 G+TFK T Sbjct: 126 GKTFKAT 132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.129 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,844 Number of extensions: 783 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |