Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 20 390 NP_055903 20 390 NP_828847 17 3301 NP_001001924 17 4312 NP_001001925 17 4312 NP_563615 17 4312 XP_005273640 17 4312 XP_005273639 17 4312 XP_005273638 17 4312 XP_005273637 17 4312 XP_005273636 17 4312 XP_005273635 17 4312 XP_005273634 17 4312 XP_005265360 17 4312 XP_006713305 17 4312 XP_005265358 17 4312 XP_006713304 17 4312 XP_005265356 17 4312 XP_006713302 17 4312 XP_006713301 17 4312 XP_006713300 17 4312 XP_006713299 17 4312 XP_006713298 17 4312 NP_004509 16 5631 NP_742106 16 5631 NP_742105 16 5631 NP_742104 16 5631 NP_742107 16 5631 XP_006723855 16 5631 XP_006723854 16 5631 XP_006723853 16 5631 XP_006723852 16 5631 XP_006723851 16 5631 XP_006723850 16 5631 NP_005844 16 7355 NP_001239126 16 7355 NP_060127 16 7355 XP_005264437 16 7355 NP_982261 16 7355 NP_001002243 16 7355 NP_660305 15 9605 NP_036284 15 9605 NP_001014440 15 9605 XP_006724480 15 9605 XP_005261978 15 9605 XP_006724479 15 9605 XP_005261975 15 9605 XP_006724478 15 9605 XP_006713041 15 9605 XP_006710605 15 9605>NP_001155973 Length = 1833 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 QT+LSRTDL Sbjct: 605 QTLLSRTDL 613>NP_055903 Length = 1723 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 QT+LSRTDL Sbjct: 605 QTLLSRTDL 613>NP_828847 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QTILSRTD 8 +T+LSRTD Sbjct: 100 KTLLSRTD 107>NP_001001924 Length = 1270 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>NP_001001925 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>NP_563615 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TILSRTD 8 T+LSRTD Sbjct: 717 TLLSRTD 723>XP_005273640 Length = 969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273639 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273638 Length = 1228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273637 Length = 1228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273636 Length = 1270 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273635 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005273634 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QTILSRT 7 QT+LSRT Sbjct: 550 QTVLSRT 556>XP_005265360 Length = 1442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 40 QTIIPRSDL 48>XP_006713305 Length = 1456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 40 QTIIPRSDL 48>XP_005265358 Length = 1461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 78 QTIIPRSDL 86>XP_006713304 Length = 1468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 85 QTIIPRSDL 93>XP_005265356 Length = 1481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 85 QTIIPRSDL 93>XP_006713302 Length = 1494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 78 QTIIPRSDL 86>XP_006713301 Length = 1494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 78 QTIIPRSDL 86>XP_006713300 Length = 1500 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 85 QTIIPRSDL 93>XP_006713299 Length = 1501 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 85 QTIIPRSDL 93>XP_006713298 Length = 1501 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QTILSRTDL 9 QTI+ R+DL Sbjct: 85 QTIIPRSDL 93>NP_004509 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742106 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742105 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742104 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742107 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723855 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723854 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723853 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723852 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723851 Length = 885 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723850 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_005844 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTILSRTD 8 QT+L+R D Sbjct: 444 QTVLNRAD 451>NP_001239126 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTILSRTD 8 QT+L+R D Sbjct: 443 QTVLNRAD 450>NP_060127 Length = 909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 +TIL+++DL Sbjct: 492 ETILTKSDL 500>XP_005264437 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 +TIL+++DL Sbjct: 492 ETILTKSDL 500>NP_982261 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 +TIL+++DL Sbjct: 492 ETILTKSDL 500>NP_001002243 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QTILSRTDL 9 +TIL+++DL Sbjct: 492 ETILTKSDL 500>NP_660305 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTILSRTD 8 +T+LSR D Sbjct: 285 KTVLSRAD 292>NP_036284 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TILSRTD 8 T+LSR+D Sbjct: 326 TVLSRSD 332>NP_001014440 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 203 TILARTSL 210>XP_006724480 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 128 TILARTSL 135>XP_005261978 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 135 TILARTSL 142>XP_006724479 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 163 TILARTSL 170>XP_005261975 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 203 TILARTSL 210>XP_006724478 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TILSRTDL 9 TIL+RT L Sbjct: 231 TILARTSL 238>XP_006713041 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTILSRTD 8 +T+LSR D Sbjct: 158 KTVLSRAD 165>XP_006710605 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TILSRTD 8 T+LSR+D Sbjct: 326 TVLSRSD 332Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.131 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 337,647 Number of extensions: 505 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |