Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 18 1135 NP_001276793 17 3301 NP_001276791 17 3301 NP_001276790 17 3301 NP_001276792 17 3301 NP_058515 17 3301 XP_005263586 17 3301 XP_005263585 17 3301 XP_005263584 17 3301 XP_005263581 17 3301 XP_005263580 17 3301 XP_005263579 17 3301 XP_005263578 17 3301 NP_004127 16 7355 NP_078815 16 7355 NP_919445 16 7355 NP_061184 15 9605 NP_612393 15 9605 NP_001273697 15 9605 NP_113609 15 9605 XP_006722192 15 9605>NP_004351 Length = 882 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QSVEAGLQI 9 Q VEAGLQI Sbjct: 699 QPVEAGLQI 707>NP_001276793 Length = 890 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 272 QALQAGLQI 280>NP_001276791 Length = 1210 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 591 QALQAGLQI 599>NP_001276790 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 591 QALQAGLQI 599>NP_001276792 Length = 1184 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 584 QALQAGLQI 592>NP_058515 Length = 1201 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 583 QALQAGLQI 591>XP_005263586 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 416 QALQAGLQI 424>XP_005263585 Length = 1094 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 474 QALQAGLQI 482>XP_005263584 Length = 1095 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 475 QALQAGLQI 483>XP_005263581 Length = 1203 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 591 QALQAGLQI 599>XP_005263580 Length = 1204 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 584 QALQAGLQI 592>XP_005263579 Length = 1210 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 590 QALQAGLQI 598>XP_005263578 Length = 1210 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 Q+++AGLQI Sbjct: 591 QALQAGLQI 599>NP_004127 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QSVEAGLQI 9 ++VEAGL++ Sbjct: 530 KAVEAGLRV 538>NP_078815 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QSVEAGLQI 9 QS++ G+Q+ Sbjct: 155 QSIQRGIQV 163>NP_919445 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QSVEAGLQI 9 QS++ G+Q+ Sbjct: 181 QSIQRGIQV 189>NP_061184 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSVEAGLQ 8 QS+E G+Q Sbjct: 590 QSIEEGVQ 597>NP_612393 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVEAGLQI 9 +SVE GL++ Sbjct: 212 ESVETGLKL 220>NP_001273697 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VEAGLQI 9 VE GLQI Sbjct: 216 VEVGLQI 222>NP_113609 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QSVEAG 6 QSVEAG Sbjct: 567 QSVEAG 572>XP_006722192 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QSVEAG 6 QSVEAG Sbjct: 404 QSVEAG 409Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.125 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 363,558 Number of extensions: 271 Number of successful extensions: 21 Number of sequences better than 10000.0: 21 Number of HSP's gapped: 21 Number of HSP's successfully gapped: 21 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |