Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 175 XP_005271621 21 175 XP_006718907 21 175 XP_006718906 21 175 XP_005271619 21 175 XP_005271618 21 175 NP_075043 17 4312 XP_005267190 17 4312 XP_005267189 17 4312 XP_005267187 17 4312 XP_005267185 17 4312 XP_005267184 17 4312 NP_009055 17 4312 NP_055861 16 7355 NP_001002814 16 7355 NP_079427 16 7355 NP_001018098 16 7355 NP_060154 16 7355 NP_060550 16 7355 NP_065872 16 7355 XP_006718581 16 7355 XP_005273986 16 7355 XP_006718580 16 7355 XP_005273985 16 7355 XP_005273983 16 7355 XP_006718579 16 7355 XP_005273982 16 7355 XP_005272230 16 7355 XP_005272229 16 7355 XP_005272228 16 7355 NP_006074 16 7355 NP_001025030 16 7355 NP_001171899 15 9605 NP_056150 15 9605 NP_009160 15 9605 NP_001036171 15 9605 NP_001036170 15 9605 NP_005112 15 9605 NP_001184043 15 9605 NP_001184042 15 9605 XP_006724183 15 9605 XP_006724182 15 9605 XP_006724181 15 9605 XP_006724180 15 9605 XP_006719370 15 9605 XP_006719369 15 9605 XP_006719368 15 9605 NP_001184029 15 9605 NP_001013645 15 9605>NP_000042 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 852 QSSMNLFND 860>XP_005271621 Length = 2708 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 504 QSSMNLFND 512>XP_006718907 Length = 3050 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 852 QSSMNLFND 860>XP_006718906 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 852 QSSMNLFND 860>XP_005271619 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 852 QSSMNLFND 860>XP_005271618 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QSSMNVFND 9 QSSMN+FND Sbjct: 852 QSSMNLFND 860>NP_075043 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QSSMNVFN 8 QSS+N+F+ Sbjct: 18 QSSLNIFS 25>XP_005267190 Length = 3424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 922 QVSLNVLND 930>XP_005267189 Length = 3425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 936 QVSLNVLND 944>XP_005267187 Length = 3433 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 931 QVSLNVLND 939>XP_005267185 Length = 3437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 935 QVSLNVLND 943>XP_005267184 Length = 3438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 936 QVSLNVLND 944>NP_009055 Length = 3433 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 Q S+NV ND Sbjct: 931 QVSLNVLND 939>NP_055861 Length = 2677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 QSS N+F + Sbjct: 691 QSSKNIFTE 699>NP_001002814 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSMNVFND 9 SS+N+F D Sbjct: 500 SSLNLFED 507>NP_079427 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSMNVFND 9 SS+N+F D Sbjct: 500 SSLNLFED 507>NP_001018098 Length = 3628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSSMNVFND 9 +S +NVFN+ Sbjct: 2393 KSCLNVFNN 2401>NP_060154 Length = 3710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSSMNVFND 9 +S +NVFN+ Sbjct: 2350 KSCLNVFNN 2358>NP_060550 Length = 3585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSSMNVFND 9 +S +NVFN+ Sbjct: 2350 KSCLNVFNN 2358>NP_065872 Length = 3753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSSMNVFND 9 +S +NVFN+ Sbjct: 2393 KSCLNVFNN 2401>XP_006718581 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273986 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 139 SSMEVFN 145>XP_006718580 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273985 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273983 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 156 SSMEVFN 162>XP_006718579 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 175 SSMEVFN 181>XP_005273982 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 208 SSMEVFN 214>XP_005272230 Length = 2706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 QSS N+F + Sbjct: 691 QSSKNIFTE 699>XP_005272229 Length = 2706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 QSS N+F + Sbjct: 691 QSSKNIFTE 699>XP_005272228 Length = 2706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 QSS N+F + Sbjct: 691 QSSKNIFTE 699>NP_006074 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 ++ MN+F D Sbjct: 313 EADMNIFED 321>NP_001025030 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSMNVFN 8 SSM VFN Sbjct: 139 SSMEVFN 145>NP_001171899 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 358 QSSYNPFED 366>NP_056150 Length = 2210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSMNVFND 9 S MN+F D Sbjct: 1118 SVMNIFKD 1125>NP_009160 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 358 QSSYNPFED 366>NP_001036171 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SMNVFND 9 SMN F+D Sbjct: 87 SMNTFSD 93>NP_001036170 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SMNVFND 9 SMN F+D Sbjct: 87 SMNTFSD 93>NP_005112 Length = 2174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSSMNVFND 9 +S MN+F D Sbjct: 1079 ESVMNLFKD 1087>NP_001184043 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SMNVFND 9 SMN F+D Sbjct: 60 SMNTFSD 66>NP_001184042 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SMNVFND 9 SMN F+D Sbjct: 87 SMNTFSD 93>XP_006724183 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 317 QSSYNPFED 325>XP_006724182 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 358 QSSYNPFED 366>XP_006724181 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 358 QSSYNPFED 366>XP_006724180 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QSSMNVFND 9 QSS N F D Sbjct: 358 QSSYNPFED 366>XP_006719370 Length = 2076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSMNVFND 9 S MN+F D Sbjct: 984 SVMNIFKD 991>XP_006719369 Length = 2200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSMNVFND 9 S MN+F D Sbjct: 1108 SVMNIFKD 1115>XP_006719368 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSMNVFND 9 S MN+F D Sbjct: 1117 SVMNIFKD 1124>NP_001184029 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SMNVFND 9 SMN F+D Sbjct: 60 SMNTFSD 66>NP_001013645 Length = 222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QSSMNVFN 8 QSS VFN Sbjct: 143 QSSRRVFN 150Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.117 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 321,035 Number of extensions: 394 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |