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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000042                                                              19     869
XP_005271621                                                           19     869
XP_006718907                                                           19     869
XP_006718906                                                           19     869
XP_005271619                                                           19     869
XP_005271618                                                           19     869
NP_689991                                                              17    4312
NP_001029097                                                           17    4312
XP_006718022                                                           17    4312
XP_005270165                                                           17    4312
XP_005262957                                                           17    4312
XP_005262955                                                           17    4312
XP_005262954                                                           17    4312
XP_005262953                                                           17    4312
XP_005262950                                                           17    4312
NP_055029                                                              16    5631
NP_060066                                                              16    5631
NP_001239029                                                           16    5631
NP_001239032                                                           16    5631
NP_001239031                                                           16    5631
XP_006715929                                                           16    5631
XP_005250018                                                           16    5631
XP_005250017                                                           16    5631
XP_005250016                                                           16    5631
XP_006715928                                                           16    5631
XP_006715927                                                           16    5631
NP_057002                                                              16    5631
NP_997219                                                              16    5631
NP_001786                                                              16    7355
XP_006722457                                                           16    7355
NP_872317                                                              16    7355
NP_000477                                                              15    9605
NP_001128119                                                           15    9605
NP_940997                                                              15    9605
XP_006713973                                                           15    9605
XP_006713972                                                           15    9605
XP_006713971                                                           15    9605
NP_004937                                                              15    9605

>NP_000042
          Length = 3056

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 675 QSSIGFSV 682



>XP_005271621
          Length = 2708

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 327 QSSIGFSV 334



>XP_006718907
          Length = 3050

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 675 QSSIGFSV 682



>XP_006718906
          Length = 3056

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 675 QSSIGFSV 682



>XP_005271619
          Length = 3056

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 675 QSSIGFSV 682



>XP_005271618
          Length = 3056

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   QSSIGFSV 8
           QSSIGFSV
Sbjct: 675 QSSIGFSV 682



>NP_689991
          Length = 518

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>NP_001029097
          Length = 392

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 52 SSVGFSV 58



>XP_006718022
          Length = 309

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 52 SSVGFSV 58



>XP_005270165
          Length = 353

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 13 SSVGFSV 19



>XP_005262957
          Length = 229

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>XP_005262955
          Length = 336

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>XP_005262954
          Length = 451

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>XP_005262953
          Length = 469

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>XP_005262950
          Length = 518

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 49 SSVGFSV 55



>NP_055029
          Length = 288

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SIGFSVR 9
           SIGF+VR
Sbjct: 119 SIGFAVR 125



>NP_060066
          Length = 1624

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    QSSIGFSVR 9
            +  +GFSVR
Sbjct: 1176 EDGVGFSVR 1184



>NP_001239029
          Length = 1637

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    QSSIGFSVR 9
            +  +GFSVR
Sbjct: 1176 EDGVGFSVR 1184



>NP_001239032
          Length = 1610

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    QSSIGFSVR 9
            +  +GFSVR
Sbjct: 1176 EDGVGFSVR 1184



>NP_001239031
          Length = 1623

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    QSSIGFSVR 9
            +  +GFSVR
Sbjct: 1176 EDGVGFSVR 1184



>XP_006715929
          Length = 595

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 9  SSLGFSV 15



>XP_005250018
          Length = 595

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 9  SSLGFSV 15



>XP_005250017
          Length = 595

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 9  SSLGFSV 15



>XP_005250016
          Length = 595

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 9  SSLGFSV 15



>XP_006715928
          Length = 599

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 50 SSLGFSV 56



>XP_006715927
          Length = 636

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 50 SSLGFSV 56



>NP_057002
          Length = 163

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  SIGFSVR 9
          SIGF+VR
Sbjct: 50 SIGFAVR 56



>NP_997219
          Length = 595

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSIGFSV 8
          SS+GFSV
Sbjct: 9  SSLGFSV 15



>NP_001786
          Length = 784

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   SIGFSVR 9
           SIG+S+R
Sbjct: 404 SIGYSIR 410



>XP_006722457
          Length = 224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SSIGFSVR 9
          SS+G SVR
Sbjct: 80 SSLGISVR 87



>NP_872317
          Length = 224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SSIGFSVR 9
          SS+G SVR
Sbjct: 80 SSLGISVR 87



>NP_000477
          Length = 271

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   SIGFSV 8
           SIGFSV
Sbjct: 163 SIGFSV 168



>NP_001128119
          Length = 814

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QSSIGFSVR 9
          QSS GF V+
Sbjct: 39 QSSKGFDVK 47



>NP_940997
          Length = 730

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QSSIGFSVR 9
          QSS GF V+
Sbjct: 39 QSSKGFDVK 47



>XP_006713973
          Length = 558

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QSSIGFSVR 9
          QSS GF V+
Sbjct: 60 QSSKGFDVK 68



>XP_006713972
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QSSIGFSVR 9
          QSS GF V+
Sbjct: 60 QSSKGFDVK 68



>XP_006713971
          Length = 835

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  QSSIGFSVR 9
          QSS GF V+
Sbjct: 60 QSSKGFDVK 68



>NP_004937
          Length = 1830

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    IGFSVR 9
            IGFS+R
Sbjct: 1066 IGFSIR 1071



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.320    0.129    0.329 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 330,679
Number of extensions: 414
Number of successful extensions: 38
Number of sequences better than 10000.0: 38
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 38
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)