Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 20 509 NP_056107 17 3301 NP_001171725 17 3301 NP_109590 17 4312 NP_001265871 17 4312 NP_006744 17 4312 NP_005656 16 5631 XP_005271239 16 5631 XP_006710952 16 5631 XP_006710951 16 5631 XP_006710950 16 5631 XP_006710949 16 5631 XP_006710948 16 5631 XP_006710947 16 5631 XP_005271237 16 5631 XP_005271236 16 5631 NP_057360 16 7355 NP_733794 16 7355 NP_001186193 16 7355 NP_001159396 15 9605 NP_004089 15 9605 NP_689716 15 9605 NP_079520 15 9605 NP_998797 15 9605 NP_878915 15 9605 NP_001157101 15 9605 NP_998796 15 9605 NP_775834 15 9605 XP_006715090 15 9605 XP_006715089 15 9605 XP_006715088 15 9605 XP_005249008 15 9605 XP_006712845 15 9605 XP_005264086 15 9605 XP_005264084 15 9605 XP_005264083 15 9605 XP_006712844 15 9605 XP_005264082 15 9605 XP_005264081 15 9605 XP_005264080 15 9605 XP_006712843 15 9605 XP_005264079 15 9605 XP_005264260 15 9605 NP_060295 15 9605 NP_004088 15 9605 NP_079339 15 9605>NP_055365 Length = 1032 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QSLIAKDQY 9 QSLI KDQY Sbjct: 411 QSLIEKDQY 419>NP_056107 Length = 1104 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSLIAKDQY 9 Q LIAKD++ Sbjct: 657 QDLIAKDRF 665>NP_001171725 Length = 1114 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSLIAKDQY 9 Q LIAKD++ Sbjct: 667 QDLIAKDRF 675>NP_109590 Length = 1906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 Q L+AKD Y Sbjct: 43 QRLLAKDYY 51>NP_001265871 Length = 197 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLIAKDQY 9 SL+AKD Y Sbjct: 3 SLLAKDAY 10>NP_006744 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLIAKDQY 9 SL+AKD Y Sbjct: 3 SLLAKDAY 10>NP_005656 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 180 QSMPIKDQY 188>XP_005271239 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 91 QSMPIKDQY 99>XP_006710952 Length = 782 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_006710951 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_006710950 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_006710949 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_006710948 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_006710947 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>XP_005271237 Length = 826 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 136 QSMPIKDQY 144>XP_005271236 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QS+ KDQY Sbjct: 177 QSMPIKDQY 185>NP_057360 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 QSL+ KDQ Sbjct: 326 QSLLHKDQ 333>NP_733794 Length = 367 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 QSL+ KDQ Sbjct: 266 QSLLHKDQ 273>NP_001186193 Length = 367 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 QSL+ KDQ Sbjct: 266 QSLLHKDQ 273>NP_001159396 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QSLIAKD 7 +SL+AKD Sbjct: 13 ESLVAKD 19>NP_004089 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QSLIAKD 7 +SL+AKD Sbjct: 13 ESLVAKD 19>NP_689716 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QSL+ KD + Sbjct: 316 QSLVVKDPH 324>NP_079520 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>NP_998797 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QSL+ KD + Sbjct: 316 QSLVVKDPH 324>NP_878915 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>NP_001157101 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLIAKDQY 9 SL++KD Y Sbjct: 112 SLVSKDLY 119>NP_998796 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSLIAKDQY 9 QSL+ KD + Sbjct: 316 QSLVVKDPH 324>NP_775834 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLIAKDQ 8 SLIAKD+ Sbjct: 494 SLIAKDK 500>XP_006715090 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLIAKDQ 8 SLIAKD+ Sbjct: 338 SLIAKDK 344>XP_006715089 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLIAKDQ 8 SLIAKD+ Sbjct: 431 SLIAKDK 437>XP_006715088 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLIAKDQ 8 SLIAKD+ Sbjct: 431 SLIAKDK 437>XP_005249008 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLIAKDQ 8 SLIAKD+ Sbjct: 485 SLIAKDK 491>XP_006712845 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264086 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264084 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264083 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_006712844 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264082 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264081 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_005264080 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 527 RQLVAKDQ 534>XP_006712843 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 727 RQLVAKDQ 734>XP_005264079 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSLIAKDQ 8 + L+AKDQ Sbjct: 722 RQLVAKDQ 729>XP_005264260 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QSLIAKD 7 +SL+AKD Sbjct: 46 ESLVAKD 52>NP_060295 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSLIAKDQY 9 QSL+AK+ + Sbjct: 87 QSLLAKEAF 95>NP_004088 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QSLIAKD 7 +SL+AKD Sbjct: 46 ESLVAKD 52>NP_079339 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLIAKDQY 9 SL++KD Y Sbjct: 112 SLVSKDLY 119Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.126 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,570 Number of extensions: 436 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |