Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001186028 18 1482 NP_001186026 18 1482 NP_001186027 18 1482 NP_001186025 18 1482 NP_003924 18 1482 NP_001273393 18 1482 NP_004645 17 4312 NP_690904 17 4312 NP_690902 17 4312 NP_690903 17 4312 NP_001185792 17 4312 NP_003906 17 4312 NP_690905 17 4312 NP_004314 16 5631 NP_001165886 16 5631 NP_001034680 16 5631 NP_001034679 16 5631 NP_060786 16 5631 XP_005272733 16 5631 XP_005272732 16 5631 XP_006722848 16 5631 NP_001001952 16 5631 NP_037471 16 7355 NP_001005270 16 7355 NP_659475 16 7355 NP_003669 16 7355 NP_001002878 16 7355 NP_001002879 16 7355 NP_001002877 16 7355 NP_690047 16 7355 NP_001072990 16 7355 NP_001257943 16 7355 NP_004977 16 7355 XP_005261858 16 7355 XP_005261857 16 7355 XP_005261856 16 7355 XP_006724410 16 7355 XP_005261855 16 7355 XP_005261854 16 7355 XP_006720204 16 7355 XP_006720203 16 7355 XP_006720202 16 7355 XP_006720201 16 7355 XP_005270845 16 7355 NP_001072989 16 7355 NP_006827 15 9605 NP_001073922 15 9605 NP_055381 15 9605 NP_689936 15 9605 NP_001004487 15 9605>NP_001186028 Length = 1124 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 737 SEALCVVL 744>NP_001186026 Length = 1152 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 765 SEALCVVL 772>NP_001186027 Length = 1129 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 742 SEALCVVL 749>NP_001186025 Length = 1116 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 729 SEALCVVL 736>NP_003924 Length = 1187 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 800 SEALCVVL 807>NP_001273393 Length = 1169 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SEALCVLL 9 SEALCV+L Sbjct: 782 SEALCVVL 789>NP_004645 Length = 2555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EALCVLL 9 +ALCVLL Sbjct: 2073 DALCVLL 2079>NP_690904 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 25 KSDPLCVLL 33>NP_690902 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 25 KSDPLCVLL 33>NP_690903 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 25 KSDPLCVLL 33>NP_001185792 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 25 KSDPLCVLL 33>NP_003906 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 30 KSDPLCVLL 38>NP_690905 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 +S+ LCVLL Sbjct: 25 KSDPLCVLL 33>NP_004314 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 Q+EALC L Sbjct: 267 QAEALCKL 274>NP_001165886 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 Q+EALC L Sbjct: 152 QAEALCKL 159>NP_001034680 Length = 2554 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALCVLL 9 +ALC+LL Sbjct: 2072 DALCILL 2078>NP_001034679 Length = 2570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALCVLL 9 +ALC+LL Sbjct: 2072 DALCILL 2078>NP_060786 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 QSEA C LL Sbjct: 549 QSEAGCCLL 557>XP_005272733 Length = 2559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALCVLL 9 +ALC+LL Sbjct: 2077 DALCILL 2083>XP_005272732 Length = 2575 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALCVLL 9 +ALC+LL Sbjct: 2077 DALCILL 2083>XP_006722848 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 QSEA C LL Sbjct: 538 QSEAGCCLL 546>NP_001001952 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEALCVLL 9 S+ LCVLL Sbjct: 138 SQKLCVLL 145>NP_037471 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SEALCVLL 9 + ALC+LL Sbjct: 145 ANALCILL 152>NP_001005270 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SEALCVLL 9 S +LC+LL Sbjct: 135 SHSLCILL 142>NP_659475 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSEALCVLL 9 QS+ +C+LL Sbjct: 196 QSDDICLLL 204>NP_003669 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 625 QLQRLCVLL 633>NP_001002878 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 625 QLQRLCVLL 633>NP_001002879 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 625 QLQRLCVLL 633>NP_001002877 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 625 QLQRLCVLL 633>NP_690047 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALCVLL 9 ALCVLL Sbjct: 36 ALCVLL 41>NP_001072990 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>NP_001257943 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>NP_004977 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>XP_005261858 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 286 QLQRLCVLL 294>XP_005261857 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 352 QLQRLCVLL 360>XP_005261856 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 636 QLQRLCVLL 644>XP_006724410 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 636 QLQRLCVLL 644>XP_005261855 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 636 QLQRLCVLL 644>XP_005261854 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QSEALCVLL 9 Q + LCVLL Sbjct: 636 QLQRLCVLL 644>XP_006720204 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>XP_006720203 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>XP_006720202 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>XP_006720201 Length = 1357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>XP_005270845 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SEALCVLL 9 + ALC+LL Sbjct: 145 ANALCILL 152>NP_001072989 Length = 1357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 + EALCV+ Sbjct: 298 EDEALCVV 305>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EALCVL 8 EALCV+ Sbjct: 645 EALCVI 650>NP_001073922 Length = 2190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EALCVLL 9 EALC LL Sbjct: 182 EALCSLL 188>NP_055381 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SEALCVLL 9 S LCVLL Sbjct: 137 SPGLCVLL 144>NP_689936 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSEALCVL 8 QS+ +C+L Sbjct: 73 QSQLICIL 80>NP_001004487 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SEALCVLL 9 S LCVLL Sbjct: 137 SHRLCVLL 144Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 601,231 Number of extensions: 690 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |