Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1135 NP_001035957 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_002728 17 2528 NP_689418 16 5631 NP_115545 16 5631 NP_001017535 16 7355 NP_000367 16 7355 NP_001017536 16 7355 NP_079421 16 7355 XP_006719650 16 7355 XP_005270233 16 7355 XP_005270231 16 7355 XP_005270230 16 7355 XP_005270229 16 7355 XP_005270228 16 7355 NP_001273331 15 9605 NP_000237 15 9605 NP_056041 15 9605 NP_001230332 15 9605 XP_006720946 15 9605 XP_005255380 15 9605 XP_006720945 15 9605 XP_006720944 15 9605 XP_005255378 15 9605 XP_005255377 15 9605 XP_006720943 15 9605 XP_005255273 15 9605 XP_005255272 15 9605 XP_005255271 15 9605 XP_005255270 15 9605 XP_005255268 15 9605 XP_005255267 15 9605 NP_001074001 15 9605>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1948 QRVTAILDK 1956>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1969 QRVTAILDK 1977>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1979 QRVTAILDK 1987>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1979 QRVTAILDK 1987>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1948 QRVTAILDK 1956>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1958 QRVTAILDK 1966>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1979 QRVTAILDK 1987>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1966 QRVTAILDK 1974>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1969 QRVTAILDK 1977>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QRV AILDK Sbjct: 1979 QRVTAILDK 1987>NP_002728 Length = 672 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRVIAILDK 9 +RV+A+LDK Sbjct: 388 KRVLALLDK 396>NP_689418 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 QR++ I+DK Sbjct: 255 QRLVTIVDK 263>NP_115545 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RVIAILD 8 RVIA+LD Sbjct: 236 RVIAVLD 242>NP_001017535 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRVIAIL 7 QR+IAIL Sbjct: 129 QRIIAIL 135>NP_000367 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRVIAIL 7 QR+IAIL Sbjct: 129 QRIIAIL 135>NP_001017536 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRVIAIL 7 QR+IAIL Sbjct: 179 QRIIAIL 185>NP_079421 Length = 1665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 1551 EQTIAVLDK 1559>XP_006719650 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRVIAIL 7 QR+IAIL Sbjct: 129 QRIIAIL 135>XP_005270233 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 813 EQTIAVLDK 821>XP_005270231 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 1513 EQTIAVLDK 1521>XP_005270230 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 1513 EQTIAVLDK 1521>XP_005270229 Length = 1637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 1523 EQTIAVLDK 1531>XP_005270228 Length = 1666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRVIAILDK 9 ++ IA+LDK Sbjct: 1552 EQTIAVLDK 1560>NP_001273331 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 415 RVIAVLGK 422>NP_000237 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 414 RVIAVLGK 421>NP_056041 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 821 QRIAALLD 828>NP_001230332 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 803 QRIAALLD 810>XP_006720946 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 365 RVIAVLGK 372>XP_005255380 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 366 RVIAVLGK 373>XP_006720945 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 380 RVIAVLGK 387>XP_006720944 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 381 RVIAVLGK 388>XP_005255378 Length = 1145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 429 RVIAVLGK 436>XP_005255377 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 430 RVIAVLGK 437>XP_006720943 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVIAILDK 9 RVIA+L K Sbjct: 492 RVIAVLGK 499>XP_005255273 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 821 QRIAALLD 828>XP_005255272 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 821 QRIAALLD 828>XP_005255271 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 821 QRIAALLD 828>XP_005255270 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 803 QRIAALLD 810>XP_005255268 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 805 QRIAALLD 812>XP_005255267 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRVIAILD 8 QR+ A+LD Sbjct: 819 QRIAALLD 826>NP_001074001 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VIAILDK 9 +IA+LDK Sbjct: 411 IIALLDK 417Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.148 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 359,948 Number of extensions: 548 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |