Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_055603 16 5631 NP_150088 16 5631 XP_006717402 16 5631 XP_006717401 16 5631 XP_005252380 16 5631 XP_005252379 16 5631 XP_005252378 16 5631 XP_005252377 16 5631 NP_001265473 16 7355 NP_000057 16 7355 NP_001096121 16 7355 NP_001265472 16 7355 NP_998770 16 7355 XP_006722698 16 7355 XP_006722697 16 7355 XP_006716616 16 7355 XP_005271223 16 7355 XP_006710936 16 7355 NP_113676 15 9605 NP_003413 15 9605 NP_002902 15 9605 NP_932172 15 9605 XP_006723423 15 9605 XP_006723422 15 9605 XP_006723421 15 9605 XP_005259261 15 9605 XP_005259260 15 9605 XP_005260072 15 9605 XP_006718983 15 9605 XP_006718982 15 9605 XP_006718981 15 9605 XP_006718980 15 9605 XP_006718979 15 9605 XP_005248339 15 9605 NP_115828 15 9605 NP_001139500 15 9605 NP_079280 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRSI LRYE Sbjct: 160 QRSISLRYE 168>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRSI LRYE Sbjct: 179 QRSISLRYE 187>NP_055603 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>NP_150088 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>XP_006717402 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 208 ERSLLLKY 215>XP_006717401 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 208 ERSLLLKY 215>XP_005252380 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>XP_005252379 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>XP_005252378 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>XP_005252377 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRSILLRY 8 +RS+LL+Y Sbjct: 258 ERSLLLKY 265>NP_001265473 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSILLRYE 9 RS++L YE Sbjct: 247 RSLMLHYE 254>NP_000057 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSILLRYE 9 RS++L YE Sbjct: 309 RSLMLHYE 316>NP_001096121 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS L+R+E Sbjct: 475 QRSSLVRHE 483>NP_001265472 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSILLRYE 9 RS++L YE Sbjct: 257 RSLMLHYE 264>NP_998770 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 Q SILLR++ Sbjct: 216 QSSILLRHQ 224>XP_006722698 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS L+R+E Sbjct: 325 QRSSLVRHE 333>XP_006722697 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS L+R+E Sbjct: 474 QRSSLVRHE 482>XP_006716616 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 Q SILLR++ Sbjct: 216 QSSILLRHQ 224>XP_005271223 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSILLRYE 9 RS++L YE Sbjct: 346 RSLMLHYE 353>XP_006710936 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSILLRYE 9 RS++L YE Sbjct: 348 RSLMLHYE 355>NP_113676 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ILLRYE 9 +LLRYE Sbjct: 243 VLLRYE 248>NP_003413 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 367 QRSNLLRHQ 375>NP_002902 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ILLRYE 9 +LLRYE Sbjct: 292 VLLRYE 297>NP_932172 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 367 QRSNLLRHQ 375>XP_006723423 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 367 QRSNLLRHQ 375>XP_006723422 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 367 QRSNLLRHQ 375>XP_006723421 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 352 QRSNLLRHQ 360>XP_005259261 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 408 QRSNLLRHQ 416>XP_005259260 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSILLRYE 9 QRS LLR++ Sbjct: 408 QRSNLLRHQ 416>XP_005260072 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ILLRYE 9 +LLRYE Sbjct: 292 VLLRYE 297>XP_006718983 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445>XP_006718982 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445>XP_006718981 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445>XP_006718980 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445>XP_006718979 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445>XP_005248339 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SILLRY 8 SILLRY Sbjct: 12 SILLRY 17>NP_115828 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QRSILLRYE 9 QRS LRYE Sbjct: 298 QRSNGLRYE 306>NP_001139500 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QRSILLRYE 9 QRS LRYE Sbjct: 298 QRSNGLRYE 306>NP_079280 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSILLRYE 9 +SILL+Y+ Sbjct: 438 QSILLKYQ 445Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.144 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,775 Number of extensions: 787 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |