Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 18 1135 NP_060785 18 1135 NP_361014 18 1135 NP_001127945 18 1935 NP_001265113 18 1935 NP_055430 18 1935 XP_005255922 18 1935 XP_006721236 18 1935 XP_006721235 18 1935 XP_005255921 18 1935 XP_005255920 18 1935 XP_005255919 18 1935 XP_005255918 18 1935 XP_005255917 18 1935 XP_005255916 18 1935 NP_003599 17 3301 NP_060066 16 5631 NP_001239029 16 5631 NP_001239032 16 5631 NP_001239031 16 5631 NP_001004135 16 5631 NP_054799 16 7355 XP_005254478 16 7355 NP_072088 16 7355 NP_036270 15 9605>NP_001013433 Length = 589 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQRRRIISV 9 QQRRRI SV Sbjct: 102 QQRRRITSV 110>NP_060785 Length = 627 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQRRRIISV 9 QQRRRI SV Sbjct: 140 QQRRRITSV 148>NP_361014 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQRRRIISV 9 QQRRRI SV Sbjct: 220 QQRRRITSV 228>NP_001127945 Length = 1113 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 627 QQRRRLVS 634>NP_001265113 Length = 1144 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 658 QQRRRLVS 665>NP_055430 Length = 1217 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 731 QQRRRLVS 738>XP_005255922 Length = 1154 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 668 QQRRRLVS 675>XP_006721236 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 728 QQRRRLVS 735>XP_006721235 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 728 QQRRRLVS 735>XP_005255921 Length = 1227 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 741 QQRRRLVS 748>XP_005255920 Length = 1229 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 743 QQRRRLVS 750>XP_005255919 Length = 1860 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 1536 QQRRRLVS 1543>XP_005255918 Length = 1949 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 1463 QQRRRLVS 1470>XP_005255917 Length = 1984 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 1536 QQRRRLVS 1543>XP_005255916 Length = 2022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQRRRIIS 8 QQRRR++S Sbjct: 1536 QQRRRLVS 1543>NP_003599 Length = 337 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QQRRRIISV 9 +QR+RI+SV Sbjct: 317 RQRKRILSV 325>NP_060066 Length = 1624 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QQRRRII 7 QQRRR++ Sbjct: 770 QQRRRLV 776>NP_001239029 Length = 1637 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QQRRRII 7 QQRRR++ Sbjct: 770 QQRRRLV 776>NP_001239032 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QQRRRII 7 QQRRR++ Sbjct: 770 QQRRRLV 776>NP_001239031 Length = 1623 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QQRRRII 7 QQRRR++ Sbjct: 770 QQRRRLV 776>NP_001004135 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQRRRIISV 9 Q+RR+I+S+ Sbjct: 267 QERRKILSL 275>NP_054799 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QQRRRIISV 9 QQR RI+ + Sbjct: 762 QQRERILEI 770>XP_005254478 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QQRRRIISV 9 QQR RI+ + Sbjct: 762 QQRERILEI 770>NP_072088 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QQRRRIISV 9 Q R+R++SV Sbjct: 28 QPRKRLVSV 36>NP_036270 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QQRRRI 6 QQRRR+ Sbjct: 332 QQRRRV 337Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.143 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,622 Number of extensions: 570 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |