Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001177957 18 1482 NP_036602 18 1482 XP_006715974 18 1482 NP_055752 17 4312 XP_006717783 17 4312 XP_006717782 17 4312 NP_009057 16 5631 NP_057336 16 7355 NP_060656 16 7355 XP_006712120 16 7355 XP_005264512 16 7355 XP_005264511 16 7355 XP_006712119 16 7355 XP_005264510 16 7355 XP_006712118 16 7355 XP_005264509 16 7355 XP_005264508 16 7355 XP_006712117 16 7355 XP_005264507 16 7355 XP_005264506 16 7355 XP_005245376 16 7355 XP_005245374 16 7355 NP_001026895 15 9605 NP_076996 15 9605 NP_004740 15 9605 NP_112162 15 9605 NP_954573 15 9605 NP_001230706 15 9605 NP_001230705 15 9605 NP_001248763 15 9605 NP_055494 15 9605 NP_862820 15 9605 NP_001184188 15 9605 NP_036513 15 9605 XP_006719009 15 9605 XP_006719008 15 9605 XP_005248763 15 9605 XP_005248762 15 9605 XP_005248761 15 9605 XP_006714561 15 9605 XP_006711625 15 9605 XP_005245577 15 9605 XP_005245576 15 9605>NP_001177957 Length = 859 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 QQLVSQLL Sbjct: 767 QQLVSQLL 774>NP_036602 Length = 923 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 QQLVSQLL Sbjct: 831 QQLVSQLL 838>XP_006715974 Length = 875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 QQLVSQLL Sbjct: 783 QQLVSQLL 790>NP_055752 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQLL Sbjct: 596 QELISQLL 603>XP_006717783 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQLL Sbjct: 596 QELISQLL 603>XP_006717782 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQLL Sbjct: 553 QELISQLL 560>NP_009057 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 +++VSQLLT Sbjct: 322 RRIVSQLLT 330>NP_057336 Length = 4857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 2988 QQIMSQILS 2996>NP_060656 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVSQLLT 9 L+SQLLT Sbjct: 313 LISQLLT 319>XP_006712120 Length = 4812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 2943 QQIMSQILS 2951>XP_005264512 Length = 4840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 2971 QQIMSQILS 2979>XP_005264511 Length = 4847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3015 QQIMSQILS 3023>XP_006712119 Length = 4851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 2982 QQIMSQILS 2990>XP_005264510 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 2992 QQIMSQILS 3000>XP_006712118 Length = 4864 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3015 QQIMSQILS 3023>XP_005264509 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3001 QQIMSQILS 3009>XP_005264508 Length = 4875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3006 QQIMSQILS 3014>XP_006712117 Length = 4878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3009 QQIMSQILS 3017>XP_005264507 Length = 4880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3011 QQIMSQILS 3019>XP_005264506 Length = 4884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 QQ++SQ+L+ Sbjct: 3015 QQIMSQILS 3023>XP_005245376 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVSQLLT 9 L+SQLLT Sbjct: 178 LISQLLT 184>XP_005245374 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVSQLLT 9 L+SQLLT Sbjct: 371 LISQLLT 377>NP_001026895 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 +QL SQLL Sbjct: 392 EQLASQLL 399>NP_076996 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLVSQLLT 9 +L+SQ+LT Sbjct: 294 KLISQMLT 301>NP_004740 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 Q+L+++LLT Sbjct: 201 QELLAELLT 209>NP_112162 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 Q+L+++LLT Sbjct: 201 QELLAELLT 209>NP_954573 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 Q+L+++LLT Sbjct: 201 QELLAELLT 209>NP_001230706 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 Q+L SQLL Sbjct: 127 QELTSQLL 134>NP_001230705 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 Q+L SQLL Sbjct: 118 QELTSQLL 125>NP_001248763 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QQLVSQLLT 9 Q+L+++LLT Sbjct: 212 QELLAELLT 220>NP_055494 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 Q+L SQLL Sbjct: 127 QELTSQLL 134>NP_862820 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 149 QKLISQLM 156>NP_001184188 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 6 QKLISQLM 13>NP_036513 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 149 QKLISQLM 156>XP_006719009 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 Q+L SQLL Sbjct: 127 QELTSQLL 134>XP_006719008 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 Q+L SQLL Sbjct: 127 QELTSQLL 134>XP_005248763 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 96 QKLISQLM 103>XP_005248762 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 96 QKLISQLM 103>XP_005248761 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQLVSQLL 8 Q+L+SQL+ Sbjct: 149 QKLISQLM 156>XP_006714561 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLVSQLLT 9 +L+SQ+LT Sbjct: 294 KLISQMLT 301>XP_006711625 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 +QL SQLL Sbjct: 392 EQLASQLL 399>XP_005245577 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 +QL SQLL Sbjct: 392 EQLASQLL 399>XP_005245576 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QQLVSQLL 8 +QL SQLL Sbjct: 392 EQLASQLL 399Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.125 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,665 Number of extensions: 504 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |