Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1482 NP_671714 18 1482 XP_006715890 18 1482 XP_005250160 18 1482 XP_005250159 18 1482 NP_001177111 17 4312 NP_001108410 17 4312 NP_001193928 17 4312 NP_009105 17 4312 XP_005253886 17 4312 XP_006719269 17 4312 XP_005270591 17 4312 XP_006710452 17 4312 XP_006710451 17 4312 NP_001155899 16 5631 NP_000359 16 5631 NP_001155898 16 5631 NP_001265003 16 5631 NP_000084 16 5631 XP_006717334 16 5631 XP_005272268 16 5631 NP_000436 16 7355 NP_958780 16 7355 NP_958781 16 7355 NP_958785 16 7355 NP_958783 16 7355 NP_958786 16 7355 NP_958782 16 7355 NP_958784 16 7355 XP_006716654 16 7355 XP_005251041 16 7355 XP_005251040 16 7355 XP_006716653 16 7355 XP_006716652 16 7355 XP_005251039 16 7355 XP_005251038 16 7355 XP_005251036 16 7355 XP_005251037 16 7355 XP_005251035 16 7355 XP_006716651 16 7355 XP_005251034 16 7355 XP_005251033 16 7355 NP_001182192 15 9605 NP_001153505 15 9605 NP_056506 15 9605>NP_005742 Length = 3907 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 QLQASET R Sbjct: 244 QLQASETLR 252>NP_671714 Length = 3899 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 QLQASET R Sbjct: 244 QLQASETLR 252>XP_006715890 Length = 3860 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 QLQASET R Sbjct: 244 QLQASETLR 252>XP_005250160 Length = 3939 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 QLQASET R Sbjct: 244 QLQASETLR 252>XP_005250159 Length = 3952 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 QLQASET R Sbjct: 244 QLQASETLR 252>NP_001177111 Length = 613 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 +LQ S+TRR Sbjct: 269 ELQRSQTRR 277>NP_001108410 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 +LQ S+TRR Sbjct: 278 ELQRSQTRR 286>NP_001193928 Length = 2069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QLQASETRR 9 +L+ASET+R Sbjct: 492 ELKASETQR 500>NP_009105 Length = 2027 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QLQASETRR 9 +L+ASET+R Sbjct: 492 ELKASETQR 500>XP_005253886 Length = 1545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QLQASETRR 9 +L+ASET+R Sbjct: 26 ELKASETQR 34>XP_006719269 Length = 2054 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QLQASETRR 9 +L+ASET+R Sbjct: 492 ELKASETQR 500>XP_005270591 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 +LQ S+TRR Sbjct: 99 ELQRSQTRR 107>XP_006710452 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 +LQ S+TRR Sbjct: 269 ELQRSQTRR 277>XP_006710451 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 +LQ S+TRR Sbjct: 278 ELQRSQTRR 286>NP_001155899 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLQASETR 8 QLQA+E+R Sbjct: 889 QLQAAESR 896>NP_000359 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLQASETR 8 QLQA+E+R Sbjct: 940 QLQAAESR 947>NP_001155898 Length = 1163 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLQASETR 8 QLQA+E+R Sbjct: 939 QLQAAESR 946>NP_001265003 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQASETRR 9 +QAS TRR Sbjct: 1578 IQASRTRR 1585>NP_000084 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQASETRR 9 +QAS TRR Sbjct: 1578 IQASRTRR 1585>XP_006717334 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLQASETR 8 QLQA+E+R Sbjct: 940 QLQAAESR 947>XP_005272268 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLQASETR 8 QLQA+E+R Sbjct: 940 QLQAAESR 947>NP_000436 Length = 4574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1022 QLEACETR 1029>NP_958780 Length = 4533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 981 QLEACETR 988>NP_958781 Length = 4525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 973 QLEACETR 980>NP_958785 Length = 4551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 999 QLEACETR 1006>NP_958783 Length = 4515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 963 QLEACETR 970>NP_958786 Length = 4547 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 995 QLEACETR 1002>NP_958782 Length = 4684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1132 QLEACETR 1139>NP_958784 Length = 4547 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 995 QLEACETR 1002>XP_006716654 Length = 3562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1137 QLEACETR 1144>XP_005251041 Length = 4520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 968 QLEACETR 975>XP_005251040 Length = 4524 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 972 QLEACETR 979>XP_006716653 Length = 4529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 977 QLEACETR 984>XP_006716652 Length = 4529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 977 QLEACETR 984>XP_005251039 Length = 4530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 978 QLEACETR 985>XP_005251038 Length = 4538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 986 QLEACETR 993>XP_005251036 Length = 4552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1000 QLEACETR 1007>XP_005251037 Length = 4552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1000 QLEACETR 1007>XP_005251035 Length = 4556 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1004 QLEACETR 1011>XP_006716651 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1027 QLEACETR 1034>XP_005251034 Length = 4685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1133 QLEACETR 1140>XP_005251033 Length = 4689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQASETR 8 QL+A ETR Sbjct: 1137 QLEACETR 1144>NP_001182192 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQASETRR 9 Q+QA E+RR Sbjct: 550 QVQAWESRR 558>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QASETR 8 QASETR Sbjct: 1255 QASETR 1260>NP_056506 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQASETRR 9 LQAS TR+ Sbjct: 973 LQASRTRQ 980Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.112 0.258 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 296,883 Number of extensions: 436 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |