Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055973 17 3301 NP_001243805 17 3301 NP_694856 17 3301 NP_001243806 17 3301 XP_006716811 17 3301 XP_006716810 17 3301 XP_005251476 17 3301 XP_005251475 17 3301 XP_005251473 17 3301 XP_005251474 17 3301 XP_005251472 17 3301 XP_005251471 17 3301 XP_005251470 17 3301 XP_006716809 17 3301 XP_006716808 17 3301 XP_006716807 17 3301 XP_006716806 17 3301 XP_005251468 17 3301 XP_005251467 17 3301 NP_000929 17 4312 NP_071351 16 5631 NP_001188412 16 7355 NP_001419 16 7355 NP_079410 16 7355 XP_005256233 16 7355 XP_005256232 16 7355 XP_005256231 16 7355 XP_005256229 16 7355 XP_005256228 16 7355 XP_005256227 16 7355 XP_006721346 16 7355 XP_005256226 16 7355 XP_006721345 16 7355 XP_006721344 16 7355 XP_006721343 16 7355 XP_005256225 16 7355 XP_006720617 16 7355 XP_006710496 16 7355 NP_002408 15 9605 NP_001139438 15 9605 NP_005214 15 9605 NP_510882 15 9605 NP_114146 15 9605 NP_001019552 15 9605 NP_001019551 15 9605 NP_919274 15 9605 NP_055871 15 9605 XP_005255205 15 9605 XP_006720916 15 9605 XP_006720915 15 9605 XP_006717927 15 9605 XP_005252603 15 9605 XP_006716471 15 9605 XP_005273714 15 9605 XP_005247838 15 9605 NP_079044 15 9605>NP_055973 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_001243805 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_694856 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>NP_001243806 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716811 Length = 1120 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716810 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251476 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251475 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251473 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251474 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251472 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251471 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251470 Length = 1284 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716809 Length = 1334 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716808 Length = 1346 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716807 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716806 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_005251468 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_005251467 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTAIGKV 8 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_000929 Length = 1174 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QKTAIGKV 8 QKT IGK+ Sbjct: 145 QKTFIGKI 152>NP_071351 Length = 2752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT +GKV+ Sbjct: 2253 RKTVLGKVI 2261>NP_001188412 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTAIGK 7 KTAIGK Sbjct: 135 KTAIGK 140>NP_001419 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTAIGK 7 KTAIGK Sbjct: 228 KTAIGK 233>NP_079410 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256233 Length = 2391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 83 EKTKIGKLI 91>XP_005256232 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 116 EKTKIGKLI 124>XP_005256231 Length = 2573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256229 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256228 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256227 Length = 2897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_006721346 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256226 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_006721345 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_006721344 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_006721343 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_005256225 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 +KT IGK++ Sbjct: 590 EKTKIGKLI 598>XP_006720617 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTAIGKVL 9 QKT+ GK+L Sbjct: 197 QKTSEGKML 205>XP_006710496 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTAIGK 7 KTAIGK Sbjct: 228 KTAIGK 233>NP_002408 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTAIGKV 8 KT++GKV Sbjct: 1634 KTSLGKV 1640>NP_001139438 Length = 2896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTAIGKV 8 KT++GKV Sbjct: 1274 KTSLGKV 1280>NP_005214 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 68 TAVGKLL 74>NP_510882 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 175 TAVGKLL 181>NP_114146 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 132 TAVGKLL 138>NP_001019552 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 132 TAVGKLL 138>NP_001019551 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 132 TAVGKLL 138>NP_919274 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 353 TAVGKLL 359>NP_055871 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKTAIGK 7 +KTA+GK Sbjct: 263 KKTALGK 269>XP_005255205 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 68 TAVGKLL 74>XP_006720916 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 68 TAVGKLL 74>XP_006720915 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 68 TAVGKLL 74>XP_006717927 Length = 2406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTAIGKV 8 KT++GKV Sbjct: 784 KTSLGKV 790>XP_005252603 Length = 1457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKTAIGK 7 +KTA+GK Sbjct: 1440 KKTALGK 1446>XP_006716471 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 132 TAVGKLL 138>XP_005273714 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAIGKVL 9 TA+GK+L Sbjct: 132 TAVGKLL 138>XP_005247838 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTAIGKVL 9 K A+GK+L Sbjct: 535 KRALGKIL 542>NP_079044 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTAIGKVL 9 K A+GK+L Sbjct: 534 KRALGKIL 541Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.131 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,442 Number of extensions: 668 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |