Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004811                                                              19     869
NP_057218                                                              17    2528
NP_872433                                                              17    2528
XP_005250812                                                           17    2528
XP_005269377                                                           17    2528
XP_005269376                                                           17    2528
NP_056277                                                              17    2528
NP_002408                                                              17    4312
NP_060997                                                              17    4312
NP_001139438                                                           17    4312
NP_001104268                                                           17    4312
NP_078837                                                              17    4312
NP_476516                                                              17    4312
XP_005266579                                                           17    4312
XP_006719929                                                           17    4312
XP_005263293                                                           17    4312
NP_056471                                                              17    4312
NP_058649                                                              16    5631
NP_150094                                                              16    5631
NP_002153                                                              16    5631
NP_055767                                                              16    5631
XP_006720499                                                           16    5631
XP_005254288                                                           16    5631
XP_005254287                                                           16    5631
XP_005254286                                                           16    5631
NP_002428                                                              16    7355
NP_060896                                                              16    7355
NP_599152                                                              16    7355
NP_443166                                                              16    7355
NP_002273                                                              16    7355
NP_002272                                                              16    7355
NP_001264198                                                           16    7355
NP_056083                                                              16    7355
NP_002274                                                              16    7355
NP_002275                                                              16    7355
XP_005268923                                                           16    7355
XP_005268922                                                           16    7355
XP_005268921                                                           16    7355
XP_005249274                                                           16    7355
XP_005249273                                                           16    7355
XP_005249272                                                           16    7355
XP_005249271                                                           16    7355
XP_006715198                                                           16    7355
XP_005249269                                                           16    7355
XP_005249270                                                           16    7355
XP_005249268                                                           16    7355
XP_005247302                                                           16    7355
XP_006712084                                                           16    7355
XP_005264383                                                           16    7355
XP_006711207                                                           16    7355
XP_005275778                                                           16    7355
NP_056171                                                              15    9605
NP_874365                                                              15    9605
NP_877963                                                              15    9605
NP_002651                                                              15    9605
NP_006138                                                              15    9605
NP_001193625                                                           15    9605
NP_588614                                                              15    9605
NP_653296                                                              15    9605
NP_001275510                                                           15    9605
NP_001275508                                                           15    9605
NP_004876                                                              15    9605
NP_001275918                                                           15    9605
NP_001159451                                                           15    9605
NP_002516                                                              15    9605
NP_116115                                                              15    9605
NP_001138228                                                           15    9605
NP_444264                                                              15    9605
NP_057425                                                              15    9605
NP_055795                                                              15    9605
NP_001099003                                                           15    9605
NP_005018                                                              15    9605
NP_079189                                                              15    9605
NP_065744                                                              15    9605
NP_065075                                                              15    9605
NP_001001668                                                           15    9605
NP_059115                                                              15    9605
NP_001275509                                                           15    9605
NP_653240                                                              15    9605
NP_001159446                                                           15    9605
NP_001229290                                                           15    9605
XP_005260495                                                           15    9605
XP_005258968                                                           15    9605
XP_005258967                                                           15    9605
XP_006723273                                                           15    9605
XP_006719578                                                           15    9605
XP_006717953                                                           15    9605
XP_006717952                                                           15    9605
XP_006717951                                                           15    9605
XP_006717950                                                           15    9605
XP_006717949                                                           15    9605
XP_006717948                                                           15    9605
XP_005247964                                                           15    9605
XP_006713889                                                           15    9605
XP_006713888                                                           15    9605
XP_005246972                                                           15    9605
XP_006712867                                                           15    9605
XP_005246971                                                           15    9605
XP_006712866                                                           15    9605
XP_005246970                                                           15    9605
XP_005246749                                                           15    9605
XP_005246746                                                           15    9605
XP_005273126                                                           15    9605
XP_006711236                                                           15    9605
XP_005273123                                                           15    9605
XP_005273122                                                           15    9605
NP_001120729                                                           15    9605
>NP_004811
          Length = 506

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  QHGETLTVI 9
          QHG+T TV+
Sbjct: 76 QHGDTFTVL 84
>NP_057218
          Length = 472

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGETLTVI 9
           HG+T+TV+
Sbjct: 436 HGDTMTVM 443
>NP_872433
          Length = 358

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  HGETLTVI 9
          HGET++V+
Sbjct: 71 HGETISVL 78
>XP_005250812
          Length = 472

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGETLTVI 9
           HG+T+TV+
Sbjct: 436 HGDTMTVM 443
>XP_005269377
          Length = 358

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  HGETLTVI 9
          HGET++V+
Sbjct: 71 HGETISVL 78
>XP_005269376
          Length = 358

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  HGETLTVI 9
          HGET++V+
Sbjct: 71 HGETISVL 78
>NP_056277
          Length = 719

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   HGETLTVI 9
           HG++LTVI
Sbjct: 322 HGKSLTVI 329
>NP_002408
          Length = 3256

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  QHGETLTVI 9
          +HG+ +T+I
Sbjct: 83 KHGDVITII 91
>NP_060997
          Length = 311

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>NP_001139438
          Length = 2896

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  QHGETLTVI 9
          +HG+ +T+I
Sbjct: 83 KHGDVITII 91
>NP_001104268
          Length = 429

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>NP_078837
          Length = 864

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>NP_476516
          Length = 866

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>XP_005266579
          Length = 653

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>XP_006719929
          Length = 804

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>XP_005263293
          Length = 865

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QHGETLTV 8
          +HGETL +
Sbjct: 44 EHGETLAM 51
>NP_056471
          Length = 1882

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QHGETLTVI 9
           QH ETL+ +
Sbjct: 708 QHAETLSTV 716
>NP_058649
          Length = 933

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ +
Sbjct: 292 EHGETVNI 299
>NP_150094
          Length = 3564

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HGETLT 7
           HG+TLT
Sbjct: 545 HGDTLT 550
>NP_002153
          Length = 547

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HGETLT 7
           HG+TLT
Sbjct: 270 HGDTLT 275
>NP_055767
          Length = 780

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ V
Sbjct: 621 RHGETIRV 628
>XP_006720499
          Length = 779

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ V
Sbjct: 620 RHGETIRV 627
>XP_005254288
          Length = 806

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ V
Sbjct: 650 RHGETIRV 657
>XP_005254287
          Length = 808

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ V
Sbjct: 649 RHGETIRV 656
>XP_005254286
          Length = 809

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QHGETLTV 8
           +HGET+ V
Sbjct: 650 RHGETIRV 657
>NP_002428
          Length = 176

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  QHGETLTVI 9
          Q G TLT++
Sbjct: 47 QRGRTLTMV 55
>NP_060896
          Length = 832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 367 HNETITAI 374
>NP_599152
          Length = 887

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ETLT +
Sbjct: 784 HAETLTAL 791
>NP_443166
          Length = 791

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ETLT +
Sbjct: 784 HAETLTAL 791
>NP_002273
          Length = 493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 315 RHGETL 320
>NP_002272
          Length = 505

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 310 RHGETL 315
>NP_001264198
          Length = 2925

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    QHGETLTV 8
            Q GE LTV
Sbjct: 2589 QEGEALTV 2596
>NP_056083
          Length = 2243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    HGETLTVI 9
            HGETL  +
Sbjct: 2020 HGETLETL 2027
>NP_002274
          Length = 507

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 327 RHGETL 332
>NP_002275
          Length = 486

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 310 RHGETL 315
>XP_005268923
          Length = 563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 387 RHGETL 392
>XP_005268922
          Length = 295

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 115 RHGETL 120
>XP_005268921
          Length = 447

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 315 RHGETL 320
>XP_005249274
          Length = 832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 367 HNETITAI 374
>XP_005249273
          Length = 814

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 349 HNETITAI 356
>XP_005249272
          Length = 819

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 354 HNETITAI 361
>XP_005249271
          Length = 828

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 363 HNETITAI 370
>XP_006715198
          Length = 832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 367 HNETITAI 374
>XP_005249269
          Length = 832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 367 HNETITAI 374
>XP_005249270
          Length = 832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 367 HNETITAI 374
>XP_005249268
          Length = 841

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ET+T I
Sbjct: 376 HNETITAI 383
>XP_005247302
          Length = 2248

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    HGETLTVI 9
            HGETL  +
Sbjct: 2025 HGETLETL 2032
>XP_006712084
          Length = 160

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  QHGETLTVI 9
          Q G TLT++
Sbjct: 31 QRGRTLTMV 39
>XP_005264383
          Length = 176

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  QHGETLTVI 9
          Q G TLT++
Sbjct: 47 QRGRTLTMV 55
>XP_006711207
          Length = 791

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           H ETLT +
Sbjct: 784 HAETLTAL 791
>XP_005275778
          Length = 447

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   QHGETL 6
           +HGETL
Sbjct: 315 RHGETL 320
>NP_056171
          Length = 1630

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    GETLTVI 9
            G+TLTV+
Sbjct: 1181 GDTLTVL 1187
>NP_874365
          Length = 1655

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    GETLTVI 9
            G+TLTV+
Sbjct: 1181 GDTLTVL 1187
>NP_877963
          Length = 1290

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 380 HGHTLT 385
>NP_002651
          Length = 1291

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 380 HGHTLT 385
>NP_006138
          Length = 467

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   QHGETLTV 8
           ++G+T+TV
Sbjct: 236 EYGQTMTV 243
>NP_001193625
          Length = 372

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   QHGETLTV 8
           ++G+T+TV
Sbjct: 141 EYGQTMTV 148
>NP_588614
          Length = 789

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 397 HGHTLT 402
>NP_653296
          Length = 411

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 257 HGETL 261
>NP_001275510
          Length = 338

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 257 HGETL 261
>NP_001275508
          Length = 379

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 225 HGETL 229
>NP_004876
          Length = 522

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 491 HGETL 495
>NP_001275918
          Length = 2286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1436 HGHTLT 1441
>NP_001159451
          Length = 1994

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1144 HGHTLT 1149
>NP_002516
          Length = 1219

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QHGETLTVI 9
           Q GET TV+
Sbjct: 270 QQGETDTVL 278
>NP_116115
          Length = 762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 350 HGHTLT 355
>NP_001138228
          Length = 423

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 392 HGETL 396
>NP_444264
          Length = 420

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 389 HGETL 393
>NP_057425
          Length = 2302

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1452 HGHTLT 1457
>NP_055795
          Length = 1186

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HGETLTVI 9
           HG+ +TV+
Sbjct: 344 HGKAITVL 351
>NP_001099003
          Length = 783

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 653 HGETL 657
>NP_005018
          Length = 728

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   QHGETLTV 8
           QH + LTV
Sbjct: 703 QHNDALTV 710
>NP_079189
          Length = 1026

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 653 HGETL 657
>NP_065744
          Length = 2113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    QHGETLT 7
            QHG T+T
Sbjct: 1832 QHGVTVT 1838
>NP_065075
          Length = 831

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HGE  TV+
Sbjct: 629 HGENKTVL 636
>NP_001001668
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGETLTV 8
           HG +LTV
Sbjct: 436 HGSSLTV 442
>NP_059115
          Length = 505

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 212 HGETL 216
>NP_001275509
          Length = 379

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 225 HGETL 229
>NP_653240
          Length = 676

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HG  LTV+
Sbjct: 220 HGTVLTVL 227
>NP_001159446
          Length = 736

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HG  LTV+
Sbjct: 220 HGTVLTVL 227
>NP_001229290
          Length = 1087

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QHGETLTVI 9
           Q GET TV+
Sbjct: 138 QQGETDTVL 146
>XP_005260495
          Length = 1330

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 380 HGHTLT 385
>XP_005258968
          Length = 624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGETLTV 8
           HG +LTV
Sbjct: 436 HGSSLTV 442
>XP_005258967
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGETLTV 8
           HG +LTV
Sbjct: 385 HGSSLTV 391
>XP_006723273
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGETLTV 8
           HG +LTV
Sbjct: 436 HGSSLTV 442
>XP_006719578
          Length = 1067

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    GETLTVI 9
            GE LTVI
Sbjct: 1043 GENLTVI 1049
>XP_006717953
          Length = 2008

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1144 HGHTLT 1149
>XP_006717952
          Length = 2300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1436 HGHTLT 1441
>XP_006717951
          Length = 2315

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1452 HGHTLT 1457
>XP_006717950
          Length = 2316

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1452 HGHTLT 1457
>XP_006717949
          Length = 2316

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1452 HGHTLT 1457
>XP_006717948
          Length = 2316

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    HGETLT 7
            HG TLT
Sbjct: 1452 HGHTLT 1457
>XP_005247964
          Length = 1162

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HGETLTVI 9
           HG+ +TV+
Sbjct: 344 HGKAITVL 351
>XP_006713889
          Length = 1186

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HGETLTVI 9
           HG+ +TV+
Sbjct: 344 HGKAITVL 351
>XP_006713888
          Length = 1186

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HGETLTVI 9
           HG+ +TV+
Sbjct: 344 HGKAITVL 351
>XP_005246972
          Length = 494

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 350 HGHTLT 355
>XP_006712867
          Length = 643

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 205 HGHTLT 210
>XP_005246971
          Length = 785

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 347 HGHTLT 352
>XP_006712866
          Length = 788

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 350 HGHTLT 355
>XP_005246970
          Length = 788

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   HGETLT 7
           HG TLT
Sbjct: 350 HGHTLT 355
>XP_005246749
          Length = 381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HGE  TV+
Sbjct: 179 HGENKTVL 186
>XP_005246746
          Length = 898

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HGE  TV+
Sbjct: 696 HGENKTVL 703
>XP_005273126
          Length = 356

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 202 HGETL 206
>XP_006711236
          Length = 428

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 274 HGETL 278
>XP_005273123
          Length = 432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 278 HGETL 282
>XP_005273122
          Length = 464

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HGETL 6
           HGETL
Sbjct: 310 HGETL 314
>NP_001120729
          Length = 831

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGETLTVI 9
           HGE  TV+
Sbjct: 629 HGENKTVL 636
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.316    0.132    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 605,963
Number of extensions: 1136
Number of successful extensions: 107
Number of sequences better than 10000.0: 107
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 107
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package