Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_071349 17 4312 NP_001193849 17 4312 XP_005257625 17 4312 XP_005257624 17 4312 NP_114409 16 5631 NP_149100 16 5631 XP_005264686 16 5631 NP_036246 16 7355 NP_004790 16 7355 NP_015563 16 7355 NP_055144 16 7355 NP_001271165 15 9605 NP_001091738 15 9605 NP_002303 15 9605 NP_996820 15 9605 NP_001098721 15 9605 NP_055548 15 9605 NP_694997 15 9605 NP_001264671 15 9605 NP_063938 15 9605 XP_006723647 15 9605 XP_006723646 15 9605 XP_005260799 15 9605 XP_006723645 15 9605 XP_006723644 15 9605 XP_006720015 15 9605 XP_005254115 15 9605 XP_005254113 15 9605 XP_005254114 15 9605 XP_006720014 15 9605 XP_006720013 15 9605 XP_005273935 15 9605 XP_005273934 15 9605 XP_005273933 15 9605 XP_006718554 15 9605 XP_006718553 15 9605 XP_006718552 15 9605 XP_005248689 15 9605 XP_005264490 15 9605 NP_001092877 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1640 QDGIMVKL 1647>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 292 QDGIMVKL 299>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1292 QDGIMVKL 1299>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1634 QDGIMVKL 1641>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1640 QDGIMVKL 1647>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1640 QDGIMVKL 1647>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 QDGIMVKL Sbjct: 1640 QDGIMVKL 1647>NP_071349 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GIMVK F Sbjct: 971 EGIMVKTF 978>NP_001193849 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QDGIMVKLF 9 +DG+ +KLF Sbjct: 203 EDGLTLKLF 211>XP_005257625 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GIMVK F Sbjct: 947 EGIMVKTF 954>XP_005257624 Length = 1293 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GIMVK F Sbjct: 972 EGIMVKTF 979>NP_114409 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 Q+GIMV+L Sbjct: 438 QNGIMVEL 445>NP_149100 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIMVKLF 9 G+MVKL+ Sbjct: 693 GVMVKLY 699>XP_005264686 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIMVKLF 9 G+MVKL+ Sbjct: 613 GVMVKLY 619>NP_036246 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QDGIMVKL 8 +DG MVKL Sbjct: 98 EDGEMVKL 105>NP_004790 Length = 1425 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1223 EDGVMVQI 1230>NP_015563 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1164 EDGVMVQI 1171>NP_055144 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GIMVKLF 9 G+++KLF Sbjct: 503 GVLIKLF 509>NP_001271165 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1341 EDGLMVQI 1348>NP_001091738 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>NP_002303 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>NP_996820 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>NP_001098721 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1341 EDGLMVQI 1348>NP_055548 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1341 EDGLMVQI 1348>NP_694997 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 212 EGISVKMF 219>NP_001264671 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DGIMVKLF 9 DG+ VK F Sbjct: 409 DGLSVKFF 416>NP_063938 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DGIMVKLF 9 DG+ VK F Sbjct: 484 DGLSVKFF 491>XP_006723647 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 92 QSGIVTKVF 100>XP_006723646 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 92 QSGIVTKVF 100>XP_005260799 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 92 QSGIVTKVF 100>XP_006723645 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 92 QSGIVTKVF 100>XP_006723644 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 116 QSGIVTKVF 124>XP_006720015 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_005254115 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_005254113 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_005254114 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_006720014 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_006720013 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QDGIMVK 7 ++GIMVK Sbjct: 426 EEGIMVK 432>XP_005273935 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 213 EGISVKMF 220>XP_005273934 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 212 EGISVKMF 219>XP_005273933 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 213 EGISVKMF 220>XP_006718554 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 262 EGISVKMF 269>XP_006718553 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 263 EGISVKMF 270>XP_006718552 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGIMVKLF 9 +GI VK+F Sbjct: 263 EGISVKMF 270>XP_005248689 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QDGIMVKL 8 +DG+MV++ Sbjct: 1341 EDGLMVQI 1348>XP_005264490 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DGIMVKLF 9 DG+ VK F Sbjct: 426 DGLSVKFF 433>NP_001092877 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QDGIMVKLF 9 Q GI+ K+F Sbjct: 92 QSGIVTKVF 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.155 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,929 Number of extensions: 540 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |