Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_955525 18 1135 NP_001159405 18 1135 NP_003826 18 1135 NP_073713 18 1135 NP_001075424 18 1135 NP_056093 17 3301 NP_001243846 17 3301 NP_001182054 17 3301 XP_005266932 17 3301 XP_006715469 17 3301 XP_005266931 17 3301 NP_001094385 17 4312 XP_005255865 17 4312 XP_006721206 17 4312 NP_000912 16 5631 NP_000538 16 5631 NP_004438 16 5631 NP_783653 16 5631 XP_006719149 16 5631 XP_006719120 16 5631 XP_005253397 16 5631 XP_005253396 16 5631 XP_005264762 16 5631 XP_005264761 16 5631 XP_005264759 16 5631 XP_005264758 16 5631 XP_005264757 16 5631 XP_005264756 16 5631 XP_005264755 16 5631 NP_783652 16 5631 NP_079423 16 5631 NP_001193674 16 5631 NP_783650 16 5631 NP_001193673 16 5631 NP_001239155 16 7355 NP_006613 16 7355 NP_079160 16 7355 NP_000115 16 7355 NP_009146 16 7355 NP_997304 16 7355 NP_443134 16 7355 XP_005257166 16 7355 XP_006721795 16 7355 XP_006721794 16 7355 XP_006721714 16 7355 XP_005268134 16 7355 XP_005268132 16 7355 XP_005252905 16 7355 XP_005252904 16 7355 NP_036326 16 7355 NP_848595 16 7355 NP_001004743 16 7355 NP_000544 15 9605 NP_065822 15 9605 NP_079368 15 9605 NP_997698 15 9605 NP_055659 15 9605 NP_001166102 15 9605 NP_775894 15 9605 NP_001092264 15 9605 NP_536721 15 9605 NP_115818 15 9605 NP_115503 15 9605 NP_001030010 15 9605 NP_001009183 15 9605 NP_001009182 15 9605 NP_001005408 15 9605 NP_001597 15 9605 NP_003607 15 9605 XP_006723762 15 9605 XP_006718406 15 9605 XP_006718405 15 9605 XP_006718399 15 9605 XP_006718397 15 9605 XP_006718396 15 9605 XP_006718395 15 9605 XP_006718394 15 9605 XP_006718393 15 9605 XP_006717059 15 9605 XP_005267130 15 9605 XP_006715592 15 9605 XP_006715591 15 9605 XP_005270986 15 9605>NP_955525 Length = 378 Score = 18.5 bits (36), Expect = 1135 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VMSGCSP 9 V+SGCSP Sbjct: 357 VLSGCSP 363>NP_001159405 Length = 484 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVMSGCSP 9 A+MSGC P Sbjct: 259 AIMSGCLP 266>NP_003826 Length = 674 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVMSGCSP 9 A+MSGC P Sbjct: 262 AIMSGCLP 269>NP_073713 Length = 985 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAVMSGCSP 9 QAVMSG SP Sbjct: 96 QAVMSGRSP 104>NP_001075424 Length = 671 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVMSGCSP 9 A+MSGC P Sbjct: 259 AIMSGCLP 266>NP_056093 Length = 1247 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGCSP Sbjct: 717 LSGCSP 722>NP_001243846 Length = 143 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 AVMS C P Sbjct: 111 AVMSACCP 118>NP_001182054 Length = 158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 AVMS C P Sbjct: 126 AVMSACCP 133>XP_005266932 Length = 1008 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGCSP Sbjct: 478 LSGCSP 483>XP_006715469 Length = 1235 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGCSP Sbjct: 705 LSGCSP 710>XP_005266931 Length = 1283 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGCSP Sbjct: 753 LSGCSP 758>NP_001094385 Length = 926 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 M GCSP Sbjct: 258 MGGCSP 263>XP_005255865 Length = 917 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 M GCSP Sbjct: 258 MGGCSP 263>XP_006721206 Length = 921 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 M GCSP Sbjct: 253 MGGCSP 258>NP_000912 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVMSGCS 8 A MSGCS Sbjct: 298 AEMSGCS 304>NP_000538 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>NP_004438 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAVMSGCS 8 QAVM CS Sbjct: 137 QAVMHSCS 144>NP_783653 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>XP_006719149 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVMSGCS 8 A MSGCS Sbjct: 298 AEMSGCS 304>XP_006719120 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAVMSGCS 8 QAVM CS Sbjct: 137 QAVMHSCS 144>XP_005253397 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAVMSGCS 8 QAVM CS Sbjct: 137 QAVMHSCS 144>XP_005253396 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAVMSGCS 8 QAVM CS Sbjct: 148 QAVMHSCS 155>XP_005264762 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264761 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264759 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264758 Length = 901 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264757 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264756 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>XP_005264755 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 140 ANMSGCLP 147>NP_783652 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>NP_079423 Length = 238 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 V+SGC P Sbjct: 13 VVSGCRP 19>NP_001193674 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>NP_783650 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>NP_001193673 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A MSGC P Sbjct: 128 ANMSGCLP 135>NP_001239155 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VMSGCS 8 +MSGCS Sbjct: 647 LMSGCS 652>NP_006613 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VMSGCS 8 +MSGCS Sbjct: 661 LMSGCS 666>NP_079160 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 269 LSGCTP 274>NP_000115 Length = 1493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AVMSGCSP 9 A+M G SP Sbjct: 1270 AIMDGASP 1277>NP_009146 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AVMSGCSP 9 +++SGC P Sbjct: 90 SLLSGCHP 97>NP_997304 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 37 LSGCAP 42>NP_443134 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VMSGCS 8 V+SGCS Sbjct: 35 VLSGCS 40>XP_005257166 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 MSGC P Sbjct: 1 MSGCFP 6>XP_006721795 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 MSGC P Sbjct: 1 MSGCFP 6>XP_006721794 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 MSGC P Sbjct: 1 MSGCFP 6>XP_006721714 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AVMSGCSP 9 +++SGC P Sbjct: 90 SLLSGCHP 97>XP_005268134 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 87 LSGCTP 92>XP_005268132 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 269 LSGCTP 274>XP_005252905 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAVMSGCSP 9 QA++SG P Sbjct: 186 QAILSGAVP 194>XP_005252904 Length = 1855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAVMSGCSP 9 QA++SG P Sbjct: 186 QAILSGAVP 194>NP_036326 Length = 1849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAVMSGCSP 9 QA++SG P Sbjct: 186 QAILSGAVP 194>NP_848595 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 MSGC P Sbjct: 1 MSGCFP 6>NP_001004743 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 M+GC+P Sbjct: 122 MAGCNP 127>NP_000544 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QAVMSGC 7 QAV +GC Sbjct: 1293 QAVKAGC 1299>NP_065822 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 96 ISGCTP 101>NP_079368 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 593 QAVVFGCT 600>NP_997698 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 1858 VSGCNP 1863>NP_055659 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MSGCS 8 MSGCS Sbjct: 368 MSGCS 372>NP_001166102 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MSGCS 8 MSGCS Sbjct: 368 MSGCS 372>NP_775894 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 AVMSGC 7 AVM GC Sbjct: 14 AVMEGC 19>NP_001092264 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 ++SGC P Sbjct: 963 LISGCGP 969>NP_536721 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 +SGC P Sbjct: 46 LSGCEP 51>NP_115818 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VMSGCS 8 V+SGCS Sbjct: 129 VVSGCS 134>NP_115503 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 ++SGC P Sbjct: 977 LISGCGP 983>NP_001030010 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MSGCS 8 MSGCS Sbjct: 1 MSGCS 5>NP_001009183 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 +SGC P Sbjct: 86 LSGCQP 91>NP_001009182 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 +SGC P Sbjct: 86 LSGCQP 91>NP_001005408 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VMSGCS 8 V+SGCS Sbjct: 129 VVSGCS 134>NP_001597 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 1828 VSGCNP 1833>NP_003607 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 +SGC P Sbjct: 86 LSGCQP 91>XP_006723762 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 MSGCSP 9 +SGC P Sbjct: 46 LSGCEP 51>XP_006718406 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 ++SGC P Sbjct: 977 LISGCGP 983>XP_006718405 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 ++SGC P Sbjct: 977 LISGCGP 983>XP_006718399 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 343 QAVVFGCT 350>XP_006718397 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 593 QAVVFGCT 600>XP_006718396 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 648 QAVVFGCT 655>XP_006718395 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 648 QAVVFGCT 655>XP_006718394 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 648 QAVVFGCT 655>XP_006718393 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAVMSGCS 8 QAV+ GC+ Sbjct: 648 QAVVFGCT 655>XP_006717059 Length = 2435 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 1827 VSGCNP 1832>XP_005267130 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 96 ISGCTP 101>XP_006715592 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 96 ISGCTP 101>XP_006715591 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MSGCSP 9 +SGC+P Sbjct: 62 ISGCTP 67>XP_005270986 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VMSGCSP 9 ++SGC P Sbjct: 76 LLSGCRP 82Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.121 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,968 Number of extensions: 415 Number of successful extensions: 83 Number of sequences better than 10000.0: 83 Number of HSP's gapped: 83 Number of HSP's successfully gapped: 83 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |