Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001273013 18 1135 XP_003960788 18 1135 XP_005257969 18 1135 XP_005275882 18 1135 NP_003368 17 3301 NP_001230662 17 3301 NP_055990 17 4312 NP_061130 17 4312 XP_005265049 17 4312 XP_006713135 17 4312 NP_940857 17 4312 NP_001243437 16 5631 NP_055699 16 5631 NP_004678 16 5631 NP_001017392 16 5631 XP_006722231 16 5631 XP_005257843 16 5631 XP_005257842 16 5631 XP_005257841 16 5631 XP_006718608 16 5631 NP_057735 16 7355 NP_001275892 16 7355 XP_006723003 16 7355 NP_001137408 16 7355 NP_689856 15 9605 NP_001073339 15 9605 NP_001073340 15 9605 NP_817084 15 9605 NP_001229437 15 9605 NP_542164 15 9605 XP_006722446 15 9605 XP_006722445 15 9605 XP_006722444 15 9605 XP_006722443 15 9605 XP_006718267 15 9605 XP_006718266 15 9605 XP_006718265 15 9605 XP_006718258 15 9605 XP_006718257 15 9605>NP_001273013 Length = 106 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ASRATCRP 9 ASRATC P Sbjct: 98 ASRATCLP 105>XP_003960788 Length = 279 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QASRATCRP 9 +A +ATCRP Sbjct: 115 RAPKATCRP 123>XP_005257969 Length = 279 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QASRATCRP 9 +A +ATCRP Sbjct: 115 RAPKATCRP 123>XP_005275882 Length = 280 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QASRATCRP 9 +A +ATCRP Sbjct: 115 RAPKATCRP 123>NP_003368 Length = 207 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRATCRP 9 +RATC+P Sbjct: 43 TRATCQP 49>NP_001230662 Length = 188 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRATCRP 9 +RATC+P Sbjct: 43 TRATCQP 49>NP_055990 Length = 2754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ASRATC 7 ASRATC Sbjct: 484 ASRATC 489>NP_061130 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASRATCRP 9 ASRA C P Sbjct: 195 ASRAACDP 202>XP_005265049 Length = 2720 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ASRATC 7 ASRATC Sbjct: 450 ASRATC 455>XP_006713135 Length = 2727 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ASRATC 7 ASRATC Sbjct: 457 ASRATC 462>NP_940857 Length = 5147 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASRATCRP 9 ASRA C P Sbjct: 2459 ASRALCSP 2466>NP_001243437 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 172 SRATARP 178>NP_055699 Length = 1082 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QASRATCRP 9 QAS TC P Sbjct: 941 QASSGTCFP 949>NP_004678 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 115 SRATARP 121>NP_001017392 Length = 1082 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QASRATCRP 9 QAS TC P Sbjct: 941 QASSGTCFP 949>XP_006722231 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 115 SRATARP 121>XP_005257843 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 115 SRATARP 121>XP_005257842 Length = 1199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 119 SRATARP 125>XP_005257841 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 129 SRATARP 135>XP_006718608 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 SRAT RP Sbjct: 172 SRATARP 178>NP_057735 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QASRATCR 8 QAS A CR Sbjct: 227 QASGAVCR 234>NP_001275892 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 +RATC P Sbjct: 541 ARATCPP 547>XP_006723003 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SRATCRP 9 +RATC P Sbjct: 597 ARATCPP 603>NP_001137408 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASRATCRP 9 ASRA RP Sbjct: 21 ASRAAARP 28>NP_689856 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASRATCRP 9 +SRA C P Sbjct: 1007 SSRAPCSP 1014>NP_001073339 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ASRATCR 8 ASR +CR Sbjct: 592 ASRTSCR 598>NP_001073340 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ASRATCR 8 ASR +CR Sbjct: 584 ASRTSCR 590>NP_817084 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ASRATCR 8 ASR +CR Sbjct: 609 ASRTSCR 615>NP_001229437 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 24 EASRETC 30>NP_542164 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 406 EASRETC 412>XP_006722446 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 406 EASRETC 412>XP_006722445 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 406 EASRETC 412>XP_006722444 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 406 EASRETC 412>XP_006722443 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 +ASR TC Sbjct: 381 EASRETC 387>XP_006718267 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 + SRATC Sbjct: 46 RVSRATC 52>XP_006718266 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 + SRATC Sbjct: 46 RVSRATC 52>XP_006718265 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 + SRATC Sbjct: 46 RVSRATC 52>XP_006718258 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 + SRATC Sbjct: 46 RVSRATC 52>XP_006718257 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QASRATC 7 + SRATC Sbjct: 46 RVSRATC 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.118 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,863 Number of extensions: 378 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |