Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_001185763 18 1135 NP_055459 18 1135 NP_001002811 18 1135 NP_001002812 18 1135 XP_006726410 18 1135 XP_006711719 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711712 18 1135 XP_006711711 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 XP_005277503 18 1135 XP_005273038 18 1135 XP_006711708 18 1135 XP_005277500 18 1135 XP_006711707 18 1135 XP_005277499 18 1135 XP_006711706 18 1135 XP_006711705 18 1135 XP_006711164 18 1135 XP_006710144 18 1135 NP_079245 16 5631 NP_001165644 16 5631 XP_005246922 16 5631 NP_003743 16 7355 NP_001254503 16 7355 NP_001273407 16 7355 NP_001032897 16 7355 NP_001186071 16 7355 NP_001093131 16 7355 XP_005255592 16 7355 NP_000548 15 9605 NP_057062 15 9605 NP_001106279 15 9605 NP_001186256 15 9605 XP_005246847 15 9605 XP_006712769 15 9605 XP_006712768 15 9605 XP_006712767 15 9605 XP_006712766 15 9605 XP_005246846 15 9605 NP_005061 15 9605 NP_963868 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 338 QVALLDLQS 346>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 338 QVALLDLQS 346>NP_001002811 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>NP_001002812 Length = 969 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 338 QVALLDLQS 346>XP_006726410 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 413 QVALLDLQS 421>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 338 QVALLDLQS 346>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 338 QVALLDLQS 346>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 341 QVALLDLQS 349>XP_006711712 Length = 2473 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711711 Length = 2482 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 404 QVALLDLQS 412>XP_005277503 Length = 2498 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_005273038 Length = 2509 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711708 Length = 2512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_005277500 Length = 2525 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711707 Length = 2553 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_005277499 Length = 2561 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711706 Length = 2591 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711705 Length = 2592 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>XP_006711164 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 413 QVALLDLQS 421>XP_006710144 Length = 564 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 Q ALLDLQS Sbjct: 501 QVALLDLQS 509>NP_079245 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 QAA+L LQS Sbjct: 324 QAAVLHLQS 332>NP_001165644 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 QAA+L LQS Sbjct: 324 QAAVLHLQS 332>XP_005246922 Length = 617 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAALLDLQS 9 QAA+L LQS Sbjct: 356 QAAVLHLQS 364>NP_003743 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 632 ALLDIQS 638>NP_001254503 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 632 ALLDIQS 638>NP_001273407 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 622 ALLDIQS 628>NP_001032897 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 632 ALLDIQS 638>NP_001186071 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 632 ALLDIQS 638>NP_001093131 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 633 ALLDIQS 639>XP_005255592 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLDLQS 9 ALLD+QS Sbjct: 633 ALLDIQS 639>NP_000548 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AALLDLQS 9 AALLD++S Sbjct: 275 AALLDVRS 282>NP_057062 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAALLDLQS 9 Q +LDLQS Sbjct: 554 QKRILDLQS 562>NP_001106279 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAALLDLQS 9 Q +LDLQS Sbjct: 668 QKRILDLQS 676>NP_001186256 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAALLDLQS 9 Q +LDLQS Sbjct: 668 QKRILDLQS 676>XP_005246847 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 184 AALLDLE 190>XP_006712769 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 209 AALLDLE 215>XP_006712768 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 300 AALLDLE 306>XP_006712767 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 300 AALLDLE 306>XP_006712766 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 329 AALLDLE 335>XP_005246846 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 409 AALLDLE 415>NP_005061 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 382 AALLDLE 388>NP_963868 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALLDLQ 8 AALLDL+ Sbjct: 409 AALLDLE 415Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.123 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 368,590 Number of extensions: 303 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |