Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 21 175 NP_444254 21 175 NP_444253 21 175 NP_444255 21 175 NP_444260 21 175 NP_444259 21 175 XP_005247551 21 175 XP_005247550 21 175 XP_006713712 21 175 XP_005247549 21 175 NP_001188457 17 4312 NP_001188458 17 4312 NP_002585 17 4312 NP_003873 16 5631 NP_543028 16 5631 NP_001191799 16 5631 NP_006285 16 5631 NP_001025054 16 5631 NP_001186904 16 5631 NP_060107 16 5631 NP_055754 16 5631 XP_005258292 16 5631 XP_006722483 16 5631 XP_005258291 16 5631 XP_005258290 16 5631 XP_006716851 16 5631 XP_006716850 16 5631 XP_006716849 16 5631 XP_006716848 16 5631 XP_006716847 16 5631 XP_006716743 16 5631 NP_001035805 16 5631 NP_055826 16 7355 NP_001185879 16 7355 NP_037498 16 7355 NP_057300 16 7355 NP_060903 16 7355 NP_001140160 16 7355 NP_056173 16 7355 NP_997304 16 7355 XP_006724049 16 7355 XP_006724048 16 7355 NP_067648 16 7355 NP_004906 15 9605 NP_997511 15 9605 NP_058198 15 9605 NP_997512 15 9605 NP_997510 15 9605 NP_997057 15 9605 NP_001136019 15 9605 NP_775930 15 9605 NP_075463 15 9605 XP_006719812 15 9605 XP_005248394 15 9605 NP_001135977 15 9605 NP_071452 15 9605 NP_954993 15 9605>NP_444256 Length = 1794 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1689 PYFSKTIRD 1697>NP_444254 Length = 1845 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1740 PYFSKTIRD 1748>NP_444253 Length = 1914 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1809 PYFSKTIRD 1817>NP_444255 Length = 1863 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1758 PYFSKTIRD 1766>NP_444260 Length = 154 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 49 PYFSKTIRD 57>NP_444259 Length = 153 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 48 PYFSKTIRD 56>XP_005247551 Length = 1855 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1750 PYFSKTIRD 1758>XP_005247550 Length = 1856 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1751 PYFSKTIRD 1759>XP_006713712 Length = 1923 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1818 PYFSKTIRD 1826>XP_005247549 Length = 1924 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 PY SKTIRD Sbjct: 1819 PYFSKTIRD 1827>NP_001188457 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 PY+ + +RD Sbjct: 579 PYIDQVVRD 587>NP_001188458 Length = 603 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 PY+ + +RD Sbjct: 563 PYIDQVVRD 571>NP_002585 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 PY+ + +RD Sbjct: 598 PYIDQVVRD 606>NP_003873 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PYLSKTI 7 PY SKTI Sbjct: 312 PYKSKTI 318>NP_543028 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PYLSKTI 7 PY SKTI Sbjct: 225 PYKSKTI 231>NP_001191799 Length = 122 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PYLSKTI 7 PY SKTI Sbjct: 67 PYKSKTI 73>NP_006285 Length = 111 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 PYL + IR+ Sbjct: 93 PYLKEVIRE 101>NP_001025054 Length = 1288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P+LSKT R Sbjct: 467 PHLSKTSR 474>NP_001186904 Length = 79 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 PYL + IR+ Sbjct: 61 PYLKEVIRE 69>NP_060107 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 906 PSLSKDLRD 914>NP_055754 Length = 1435 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P++ KTIR Sbjct: 362 PHIEKTIR 369>XP_005258292 Length = 1161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P++ KTIR Sbjct: 88 PHIEKTIR 95>XP_006722483 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P++ KTIR Sbjct: 363 PHIEKTIR 370>XP_005258291 Length = 1406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P++ KTIR Sbjct: 363 PHIEKTIR 370>XP_005258290 Length = 1436 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P++ KTIR Sbjct: 363 PHIEKTIR 370>XP_006716851 Length = 1008 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 815 PSLSKDLRD 823>XP_006716850 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 928 PSLSKDLRD 936>XP_006716849 Length = 1125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 932 PSLSKDLRD 940>XP_006716848 Length = 1127 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 934 PSLSKDLRD 942>XP_006716847 Length = 1149 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PYLSKTIRD 9 P LSK +RD Sbjct: 956 PSLSKDLRD 964>XP_006716743 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PYLSKTI 7 PY SKTI Sbjct: 147 PYKSKTI 153>NP_001035805 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PYLSKTIRD 9 P+++KT RD Sbjct: 120 PHIAKTQRD 128>NP_055826 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YLSKTIRD 9 YL++TI+D Sbjct: 621 YLNQTIQD 628>NP_001185879 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YLSKTIRD 9 YL++TI+D Sbjct: 643 YLNQTIQD 650>NP_037498 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YLSKTIRD 9 YL K +RD Sbjct: 798 YLQKKVRD 805>NP_057300 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PYLSKTIR 8 PY S TIR Sbjct: 141 PYNSSTIR 148>NP_060903 Length = 1321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P+LS TIR Sbjct: 42 PWLSGTIR 49>NP_001140160 Length = 1321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P+LS TIR Sbjct: 42 PWLSGTIR 49>NP_056173 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YLSKTIR 8 +LSKT+R Sbjct: 294 FLSKTVR 300>NP_997304 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSKTIRD 9 +SKT+RD Sbjct: 452 MSKTLRD 458>XP_006724049 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YLSKTIR 8 +LSKT+R Sbjct: 333 FLSKTVR 339>XP_006724048 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YLSKTIR 8 +LSKT+R Sbjct: 223 FLSKTVR 229>NP_067648 Length = 135 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YLSKTI 7 YLSKTI Sbjct: 125 YLSKTI 130>NP_004906 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 499 YLAKTMAD 506>NP_997511 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 465 YLAKTMAD 472>NP_058198 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 487 YLAKTMAD 494>NP_997512 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 484 YLAKTMAD 491>NP_997510 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 489 YLAKTMAD 496>NP_997057 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 498 YLAKTMAD 505>NP_001136019 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 PY S+T++ Sbjct: 322 PYFSRTLQ 329>NP_775930 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 PY S+T++ Sbjct: 337 PYFSRTLQ 344>NP_075463 Length = 3013 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YLSKT+ + Sbjct: 537 YLSKTLTE 544>XP_006719812 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YLSKT+ + Sbjct: 534 YLSKTLTE 541>XP_005248394 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PYLSKTIR 8 P+LS+T R Sbjct: 26 PFLSRTSR 33>NP_001135977 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 468 YLAKTMAD 475>NP_071452 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YL+KT+ D Sbjct: 468 YLAKTMAD 475>NP_954993 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YLSKTIRD 9 YLS+ +RD Sbjct: 418 YLSQMLRD 425Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,695 Number of extensions: 643 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |