Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008872 16 5631 NP_000337 16 5631 NP_005219 16 7355 NP_776182 16 7355 NP_006475 16 7355 NP_004705 16 7355 NP_006474 16 7355 NP_003449 16 7355 XP_005259455 16 7355 XP_006723528 16 7355 XP_006723527 16 7355 XP_005259452 16 7355 XP_006713443 16 7355 NP_006099 15 9605 NP_127493 15 9605 NP_127494 15 9605 NP_001157108 15 9605 NP_001509 15 9605 NP_127492 15 9605 NP_067585 15 9605 NP_004318 15 9605 NP_060876 15 9605 NP_036321 15 9605 NP_722452 15 9605 NP_003119 15 9605 XP_005258303 15 9605 XP_005258302 15 9605 XP_005250353 15 9605 XP_006716008 15 9605 XP_006716007 15 9605 XP_006716006 15 9605 XP_006716005 15 9605 XP_006716004 15 9605 XP_006716003 15 9605 XP_006716002 15 9605 XP_005250348 15 9605 XP_005264575 15 9605 XP_006712150 15 9605 XP_005264574 15 9605>NP_008872 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKEATS 9 PV I+EA S Sbjct: 69 PVCIREAVS 77>NP_000337 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKEATS 9 PV I+EA S Sbjct: 70 PVCIREAVS 78>NP_005219 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PVAIKE 6 PVAIKE Sbjct: 741 PVAIKE 746>NP_776182 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVAIKEAT 8 PVA KEA+ Sbjct: 360 PVATKEAS 367>NP_006475 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 34 PLAFRDATS 42>NP_004705 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 34 PLAFRDATS 42>NP_006474 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 34 PLAFRDATS 42>NP_003449 Length = 3926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PVAIKEA 7 P AIKEA Sbjct: 2316 PAAIKEA 2322>XP_005259455 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 34 PLAFRDATS 42>XP_006723528 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 94 PLAFRDATS 102>XP_006723527 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 94 PLAFRDATS 102>XP_005259452 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKEATS 9 P+A ++ATS Sbjct: 94 PLAFRDATS 102>XP_006713443 Length = 3970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PVAIKEA 7 P AIKEA Sbjct: 2360 PAAIKEA 2366>NP_006099 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVAIKEAT 8 PVA+ E+T Sbjct: 129 PVAVTEST 136>NP_127493 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 794 AIKESTS 800>NP_127494 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 793 AIKESTS 799>NP_001157108 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 792 AIKESTS 798>NP_001509 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 773 AIKESTS 779>NP_127492 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 814 AIKESTS 820>NP_067585 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PVAIKEAT 8 PV + EAT Sbjct: 396 PVVVSEAT 403>NP_004318 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PVAIKEAT 8 PV + EAT Sbjct: 396 PVVVSEAT 403>NP_060876 Length = 5412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVAIKEATS 9 P+A+ ATS Sbjct: 4240 PLAVSSATS 4248>NP_036321 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVAIKEATS 9 PV IKE S Sbjct: 203 PVVIKEVPS 211>NP_722452 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVAIKEATS 9 PV IKE S Sbjct: 185 PVVIKEVPS 193>NP_003119 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKEA 7 PV++KEA Sbjct: 2254 PVSLKEA 2260>XP_005258303 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVAIKEATS 9 PV IKE S Sbjct: 105 PVVIKEVPS 113>XP_005258302 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVAIKEATS 9 PV IKE S Sbjct: 105 PVVIKEVPS 113>XP_005250353 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 785 AIKESTS 791>XP_006716008 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 804 AIKESTS 810>XP_006716007 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 805 AIKESTS 811>XP_006716006 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 806 AIKESTS 812>XP_006716005 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 814 AIKESTS 820>XP_006716004 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 819 AIKESTS 825>XP_006716003 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 825 AIKESTS 831>XP_006716002 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 826 AIKESTS 832>XP_005250348 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AIKEATS 9 AIKE+TS Sbjct: 826 AIKESTS 832>XP_005264575 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKEA 7 PV++KEA Sbjct: 2241 PVSLKEA 2247>XP_006712150 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKEA 7 PV++KEA Sbjct: 2254 PVSLKEA 2260>XP_005264574 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKEA 7 PV++KEA Sbjct: 2254 PVSLKEA 2260Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.113 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,484 Number of extensions: 564 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |