Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000542                                                              18    1935
NP_937799                                                              18    1935
XP_005276341                                                           18    1935
XP_005249982                                                           18    1935
XP_005276054                                                           18    1935
NP_057331                                                              17    4312
NP_008961                                                              17    4312
NP_694953                                                              17    4312
NP_000918                                                              17    4312
NP_848599                                                              17    4312
NP_036586                                                              17    4312
NP_001010927                                                           17    4312
XP_005248294                                                           17    4312
XP_006713081                                                           17    4312
NP_061720                                                              17    4312
NP_742152                                                              16    5631
NP_057225                                                              16    5631
XP_005269663                                                           16    5631
NP_000113                                                              16    7355
NP_689826                                                              16    7355
NP_055906                                                              16    7355
NP_001094064                                                           16    7355
NP_060189                                                              16    7355
NP_061763                                                              16    7355
XP_006722786                                                           16    7355
XP_005267508                                                           16    7355
XP_006717128                                                           16    7355
XP_005265303                                                           16    7355
XP_005265302                                                           16    7355
NP_001315                                                              16    7355
NP_001028693                                                           16    7355
NP_001028694                                                           16    7355
NP_001001968                                                           16    7355
NP_002826                                                              15    9605
NP_036359                                                              15    9605
NP_064551                                                              15    9605
NP_001229602                                                           15    9605
NP_056250                                                              15    9605
NP_001138776                                                           15    9605
NP_624311                                                              15    9605
NP_057143                                                              15    9605
NP_001005188                                                           15    9605
NP_006612                                                              15    9605
NP_001155053                                                           15    9605
NP_001229604                                                           15    9605
NP_001229603                                                           15    9605
NP_001229605                                                           15    9605
NP_699172                                                              15    9605
NP_001120833                                                           15    9605
NP_660337                                                              15    9605
NP_570981                                                              15    9605
NP_443111                                                              15    9605
NP_001267468                                                           15    9605
NP_079525                                                              15    9605
NP_954660                                                              15    9605
NP_954658                                                              15    9605
NP_001138777                                                           15    9605
NP_904355                                                              15    9605
NP_694882                                                              15    9605
NP_001269376                                                           15    9605
NP_079496                                                              15    9605
XP_006725507                                                           15    9605
XP_006724931                                                           15    9605
XP_006724510                                                           15    9605
XP_006723705                                                           15    9605
XP_006723704                                                           15    9605
XP_006723703                                                           15    9605
XP_006723702                                                           15    9605
XP_005260900                                                           15    9605
XP_006723701                                                           15    9605
XP_006723700                                                           15    9605
XP_006723699                                                           15    9605
XP_006723698                                                           15    9605
XP_006723697                                                           15    9605
XP_006723696                                                           15    9605
XP_006723695                                                           15    9605
XP_006723626                                                           15    9605
XP_006722976                                                           15    9605
XP_005260141                                                           15    9605
XP_005255218                                                           15    9605
XP_005268670                                                           15    9605
XP_006719278                                                           15    9605
XP_005250911                                                           15    9605
XP_005250910                                                           15    9605
XP_006716136                                                           15    9605
XP_006713146                                                           15    9605
XP_005265076                                                           15    9605
XP_005246709                                                           15    9605
XP_003960032                                                           15    9605
XP_006710421                                                           15    9605
XP_006710420                                                           15    9605
XP_005270517                                                           15    9605
XP_006710419                                                           15    9605
NP_001164275                                                           15    9605
NP_056241                                                              15    9605
NP_001155052                                                           15    9605
>NP_000542
          Length = 213

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           P  TGR++H
Sbjct: 102 PPGTGRRIH 110
>NP_937799
          Length = 172

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           P  TGR++H
Sbjct: 102 PPGTGRRIH 110
>XP_005276341
          Length = 254

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           PTA+GR  H
Sbjct: 175 PTASGRSQH 183
>XP_005249982
          Length = 254

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           PTA+GR  H
Sbjct: 175 PTASGRSQH 183
>XP_005276054
          Length = 254

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           PTA+GR  H
Sbjct: 175 PTASGRSQH 183
>NP_057331
          Length = 1241

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   PTATGRQV 8
           P+ATGR++
Sbjct: 442 PSATGREL 449
>NP_008961
          Length = 219

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  ATGRQVH 9
          ATGR++H
Sbjct: 66 ATGREMH 72
>NP_694953
          Length = 1156

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           P+A G +VH
Sbjct: 106 PSAVGERVH 114
>NP_000918
          Length = 1280

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ATGRQVH 9
           A GRQ+H
Sbjct: 139 AAGRQIH 145
>NP_848599
          Length = 3092

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PTATGRQVH 9
            PT TG+ V+
Sbjct: 1893 PTGTGKSVY 1901
>NP_036586
          Length = 1701

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    PTATGRQ 7
            PTA GRQ
Sbjct: 1533 PTAEGRQ 1539
>NP_001010927
          Length = 626

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   PTATGRQ 7
           PTA GRQ
Sbjct: 458 PTAEGRQ 464
>XP_005248294
          Length = 311

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   ATGRQVH 9
           ATGR++H
Sbjct: 158 ATGREMH 164
>XP_006713081
          Length = 3964

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PTATGRQVH 9
            PT TG+ V+
Sbjct: 1916 PTGTGKSVY 1924
>NP_061720
          Length = 4024

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PTATGRQVH 9
            PT TG+ V+
Sbjct: 1977 PTGTGKSVY 1985
>NP_742152
          Length = 200

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  PTATGRQVH 9
          PT TG+  H
Sbjct: 27 PTTTGKGCH 35
>NP_057225
          Length = 523

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   PTATGRQV 8
           PTA GR V
Sbjct: 388 PTAAGRPV 395
>XP_005269663
          Length = 163

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  PTATGRQV 8
          PTA GR V
Sbjct: 37 PTAPGRMV 44
>NP_000113
          Length = 782

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  PTATGRQV 8
          P+A G+QV
Sbjct: 39 PSAAGKQV 46
>NP_689826
          Length = 309

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PTATGRQVH 9
           P+A+  QVH
Sbjct: 300 PSASSSQVH 308
>NP_055906
          Length = 1720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PTATGRQVH 9
            P+A GR+ H
Sbjct: 1437 PSAKGRRSH 1445
>NP_001094064
          Length = 765

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   PTATGRQ 7
           PTA+GR+
Sbjct: 434 PTASGRK 440
>NP_060189
          Length = 765

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   PTATGRQ 7
           PTA+GR+
Sbjct: 434 PTASGRK 440
>NP_061763
          Length = 793

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PTATGRQV 8
           P +TGR+V
Sbjct: 774 PQSTGREV 781
>XP_006722786
          Length = 370

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1  PTATGRQVH 9
          P  TG Q H
Sbjct: 50 PMETGNQTH 58
>XP_005267508
          Length = 1773

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PTATGRQVH 9
            P+A GR+ H
Sbjct: 1490 PSAKGRRSH 1498
>XP_006717128
          Length = 355

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PTATGRQVH 9
           P  TG  VH
Sbjct: 180 PDVTGNMVH 188
>XP_005265303
          Length = 765

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   PTATGRQ 7
           PTA+GR+
Sbjct: 434 PTASGRK 440
>XP_005265302
          Length = 765

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   PTATGRQ 7
           PTA+GR+
Sbjct: 434 PTASGRK 440
>NP_001315
          Length = 431

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TGRQVH 9
           +GRQVH
Sbjct: 350 SGRQVH 355
>NP_001028693
          Length = 431

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TGRQVH 9
           +GRQVH
Sbjct: 350 SGRQVH 355
>NP_001028694
          Length = 431

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TGRQVH 9
           +GRQVH
Sbjct: 350 SGRQVH 355
>NP_001001968
          Length = 331

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   PTATGRQ 7
           P+A+GRQ
Sbjct: 232 PSASGRQ 238
>NP_002826
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PTATG +
Sbjct: 49 PTATGEK 55
>NP_036359
          Length = 516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   ATGRQV 8
           ATGRQ+
Sbjct: 458 ATGRQI 463
>NP_064551
          Length = 725

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  TATGRQV 8
          TATGR +
Sbjct: 43 TATGRNI 49
>NP_001229602
          Length = 483

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PT TGR+
Sbjct: 8  PTKTGRR 14
>NP_056250
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 391 PVYVGRKIH 399
>NP_001138776
          Length = 1367

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           PT T  QVH
Sbjct: 398 PTMTKIQVH 406
>NP_624311
          Length = 492

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  PTATGR 6
          PT TGR
Sbjct: 56 PTGTGR 61
>NP_057143
          Length = 166

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  PTATGR 6
          PT TGR
Sbjct: 67 PTGTGR 72
>NP_001005188
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PTATGRQ 7
           P+ATG Q
Sbjct: 227 PSATGHQ 233
>NP_006612
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PT TGR+
Sbjct: 55 PTKTGRR 61
>NP_001155053
          Length = 369

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  TATGRQVH 9
          TAT R VH
Sbjct: 65 TATVRSVH 72
>NP_001229604
          Length = 483

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PT TGR+
Sbjct: 8  PTKTGRR 14
>NP_001229603
          Length = 483

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PT TGR+
Sbjct: 8  PTKTGRR 14
>NP_001229605
          Length = 483

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PT TGR+
Sbjct: 8  PTKTGRR 14
>NP_699172
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 377 PVYVGRKIH 385
>NP_001120833
          Length = 587

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 376 PVYVGRKIH 384
>NP_660337
          Length = 1748

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTA+GR
Sbjct: 278 PTASGR 283
>NP_570981
          Length = 161

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  PTATGR 6
          PT TGR
Sbjct: 56 PTGTGR 61
>NP_443111
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 415 PTVTGHQ 421
>NP_001267468
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 391 PVYVGRKIH 399
>NP_079525
          Length = 1180

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           PT T  QVH
Sbjct: 398 PTMTKIQVH 406
>NP_954660
          Length = 653

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 344 PTVTGHQ 350
>NP_954658
          Length = 723

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 414 PTVTGHQ 420
>NP_001138777
          Length = 1134

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           PT T  QVH
Sbjct: 352 PTMTKIQVH 360
>NP_904355
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 391 PVYVGRKIH 399
>NP_694882
          Length = 787

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 742 PTATGQ 747
>NP_001269376
          Length = 812

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 768 PTATGQ 773
>NP_079496
          Length = 813

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 768 PTATGQ 773
>XP_006725507
          Length = 337

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P A G ++H
Sbjct: 264 PAAAGAKIH 272
>XP_006724931
          Length = 377

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   ATGRQV 8
           ATGRQ+
Sbjct: 319 ATGRQI 324
>XP_006724510
          Length = 377

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   ATGRQV 8
           ATGRQ+
Sbjct: 319 ATGRQI 324
>XP_006723705
          Length = 735

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 690 PTATGQ 695
>XP_006723704
          Length = 742

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 697 PTATGQ 702
>XP_006723703
          Length = 823

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 778 PTATGQ 783
>XP_006723702
          Length = 825

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 781 PTATGQ 786
>XP_005260900
          Length = 826

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 781 PTATGQ 786
>XP_006723701
          Length = 863

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 818 PTATGQ 823
>XP_006723700
          Length = 869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 824 PTATGQ 829
>XP_006723699
          Length = 870

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 825 PTATGQ 830
>XP_006723698
          Length = 876

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 831 PTATGQ 836
>XP_006723697
          Length = 882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 837 PTATGQ 842
>XP_006723696
          Length = 882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 838 PTATGQ 843
>XP_006723695
          Length = 883

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTATG+
Sbjct: 838 PTATGQ 843
>XP_006723626
          Length = 266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   PTATGR 6
           PT TGR
Sbjct: 213 PTGTGR 218
>XP_006722976
          Length = 1085

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           PT T  QVH
Sbjct: 398 PTMTKIQVH 406
>XP_005260141
          Length = 1367

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           PT T  QVH
Sbjct: 398 PTMTKIQVH 406
>XP_005255218
          Length = 1750

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PTATGR 6
           PTA+GR
Sbjct: 278 PTASGR 283
>XP_005268670
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 345 PTVTGHQ 351
>XP_006719278
          Length = 670

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 415 PTVTGHQ 421
>XP_005250911
          Length = 528

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1  PTATGRQVH 9
          P   GR++H
Sbjct: 81 PVYVGRKIH 89
>XP_005250910
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 391 PVYVGRKIH 399
>XP_006716136
          Length = 748

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  PTATGRQ 7
          PTATG +
Sbjct: 49 PTATGEK 55
>XP_006713146
          Length = 369

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  TATGRQVH 9
          TAT R VH
Sbjct: 65 TATVRSVH 72
>XP_005265076
          Length = 406

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TATGRQVH 9
           TAT R VH
Sbjct: 102 TATVRSVH 109
>XP_005246709
          Length = 161

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  PTATGR 6
          PT TGR
Sbjct: 56 PTGTGR 61
>XP_003960032
          Length = 337

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P A G ++H
Sbjct: 264 PAAAGAKIH 272
>XP_006710421
          Length = 588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 377 PVYVGRKIH 385
>XP_006710420
          Length = 688

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 377 PVYVGRKIH 385
>XP_005270517
          Length = 731

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 376 PVYVGRKIH 384
>XP_006710419
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 1   PTATGRQVH 9
           P   GR++H
Sbjct: 377 PVYVGRKIH 385
>NP_001164275
          Length = 445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   PTATGRQ 7
           PT TG Q
Sbjct: 415 PTVTGHQ 421
>NP_056241
          Length = 407

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TATGRQVH 9
           TAT R VH
Sbjct: 103 TATVRSVH 110
>NP_001155052
          Length = 359

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TATGRQVH 9
           TAT R VH
Sbjct: 103 TATVRSVH 110
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.315    0.125    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 683,903
Number of extensions: 1529
Number of successful extensions: 96
Number of sequences better than 10000.0: 96
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 96
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package