Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 22 134 NP_858045 22 134 NP_006525 22 134 NP_001167559 22 134 NP_003296 18 1935 NP_001124170 18 1935 NP_068817 18 1935 NP_001239160 18 1935 XP_005271911 18 1935 NP_005579 17 2528 NP_036230 17 3301 NP_055481 17 3301 NP_001182485 17 3301 NP_001182484 17 3301 NP_113646 17 3301 NP_001139578 17 3301 NP_001139577 17 3301 NP_001139576 17 3301 NP_001139575 17 3301 NP_001139574 17 3301 XP_006717093 17 3301 XP_005247877 17 3301 NP_783161 17 4312 NP_002842 17 4312 XP_005250576 17 4312 XP_005250008 17 4312 XP_006715921 17 4312 XP_005250007 17 4312 NP_542376 16 5631 NP_004361 16 5631 XP_006715397 16 5631 NP_001175 16 7355 NP_001026849 16 7355 NP_001180389 16 7355 NP_001180390 16 7355 NP_932346 16 7355 NP_004280 16 7355 NP_060485 16 7355 NP_001171711 16 7355 NP_001273028 16 7355 NP_060733 16 7355 NP_001013683 16 7355 NP_005272 16 7355 NP_005275 16 7355 XP_006712103 16 7355 XP_006712102 16 7355 NP_849189 15 9605 NP_775809 15 9605 NP_001273700 15 9605 NP_115593 15 9605 NP_942592 15 9605 XP_005269574 15 9605 XP_006717681 15 9605 XP_006716575 15 9605 XP_005265728 15 9605 XP_005265724 15 9605>NP_001167558 Length = 1423 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PSFNSM+NQ Sbjct: 1133 PSFNSMMNQ 1141>NP_858045 Length = 1424 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PSFNSM+NQ Sbjct: 1133 PSFNSMMNQ 1141>NP_006525 Length = 1420 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PSFNSM+NQ Sbjct: 1133 PSFNSMMNQ 1141>NP_001167559 Length = 1415 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PSFNSM+NQ Sbjct: 1128 PSFNSMMNQ 1136>NP_003296 Length = 848 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SFNSMINQ 9 SFNS++NQ Sbjct: 764 SFNSILNQ 771>NP_001124170 Length = 921 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SFNSMINQ 9 SFNS++NQ Sbjct: 837 SFNSILNQ 844>NP_068817 Length = 1093 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 P FNS +NQ Sbjct: 237 PLFNSAVNQ 245>NP_001239160 Length = 613 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 P FNS +NQ Sbjct: 237 PLFNSAVNQ 245>XP_005271911 Length = 613 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 P FNS +NQ Sbjct: 237 PLFNSAVNQ 245>NP_005579 Length = 746 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 P FNS+I Q Sbjct: 233 PEFNSIIGQ 241>NP_036230 Length = 493 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSFNSMINQ 9 P++N +INQ Sbjct: 228 PTYNRIINQ 236>NP_055481 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 PS N+MI Q Sbjct: 501 PSLNTMIQQ 509>NP_001182485 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 PS N+MI Q Sbjct: 501 PSLNTMIQQ 509>NP_001182484 Length = 643 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 PS N+MI Q Sbjct: 519 PSLNTMIQQ 527>NP_113646 Length = 854 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 307 PSFNAMV 313>NP_001139578 Length = 710 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 272 PSFNAMV 278>NP_001139577 Length = 819 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 272 PSFNAMV 278>NP_001139576 Length = 819 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 272 PSFNAMV 278>NP_001139575 Length = 819 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 272 PSFNAMV 278>NP_001139574 Length = 854 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 307 PSFNAMV 313>XP_006717093 Length = 274 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSFNSMINQ 9 P++N +INQ Sbjct: 228 PTYNRIINQ 236>XP_005247877 Length = 854 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PSFN+M+ Sbjct: 307 PSFNAMV 313>NP_783161 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSFN M++ Sbjct: 495 PSFNQMLD 502>NP_002842 Length = 2315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PSFNSMI 7 PSFN M+ Sbjct: 1057 PSFNEMV 1063>XP_005250576 Length = 2308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PSFNSMI 7 PSFN M+ Sbjct: 1057 PSFNEMV 1063>XP_005250008 Length = 456 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSFN M++ Sbjct: 286 PSFNQMLD 293>XP_006715921 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSFN M++ Sbjct: 495 PSFNQMLD 502>XP_005250007 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSFN M++ Sbjct: 495 PSFNQMLD 502>NP_542376 Length = 1899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNSMINQ 9 FN M+NQ Sbjct: 1759 FNQMLNQ 1765>NP_004361 Length = 3063 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNSMINQ 9 FN M+NQ Sbjct: 2923 FNQMLNQ 2929>XP_006715397 Length = 2972 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNSMINQ 9 FN M+NQ Sbjct: 2832 FNQMLNQ 2838>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FNSMINQ 9 FNS+IN+ Sbjct: 2341 FNSLINK 2347>NP_001026849 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSF+ +IN Sbjct: 100 PSFHDVIN 107>NP_001180389 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSF+ +IN Sbjct: 100 PSFHDVIN 107>NP_001180390 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSF+ +IN Sbjct: 100 PSFHDVIN 107>NP_932346 Length = 192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSFNSMIN 8 PSF+ +IN Sbjct: 107 PSFHDVIN 114>NP_004280 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SFNSMINQ 9 SFNSM+++ Sbjct: 561 SFNSMLSR 568>NP_060485 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 PS NS++ Q Sbjct: 112 PSLNSLVYQ 120>NP_001171711 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSFNSMINQ 9 PS NS++ Q Sbjct: 112 PSLNSLVYQ 120>NP_001273028 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 ++NSMIN Sbjct: 334 TYNSMIN 340>NP_060733 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PSFNSMIN 8 PS+ MIN Sbjct: 1325 PSYRGMIN 1332>NP_001013683 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFNSMINQ 9 SF+S INQ Sbjct: 210 SFHSSINQ 217>NP_005272 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 ++NSMIN Sbjct: 287 TYNSMIN 293>NP_005275 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 ++NSMIN Sbjct: 319 TYNSMIN 325>XP_006712103 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PSFNSMIN 8 PS+ MIN Sbjct: 1065 PSYRGMIN 1072>XP_006712102 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PSFNSMIN 8 PS+ MIN Sbjct: 1203 PSYRGMIN 1210>NP_849189 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 SFN+++N Sbjct: 125 SFNALVN 131>NP_775809 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PS++SM+++ Sbjct: 252 PSYDSMLSK 260>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PS+NS+I Sbjct: 2451 PSWNSLI 2457>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PS+NS+I Sbjct: 2564 PSWNSLI 2570>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PS+NS+I Sbjct: 2313 PSWNSLI 2319>XP_005269574 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 SFN+++N Sbjct: 137 SFNALVN 143>XP_006717681 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SFNSMIN 8 SFN+++N Sbjct: 143 SFNALVN 149>XP_006716575 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PSFNSMINQ 9 PS++SM+++ Sbjct: 252 PSYDSMLSK 260>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PS+NS+I Sbjct: 2312 PSWNSLI 2318>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PSFNSMI 7 PS+NS+I Sbjct: 2563 PSWNSLI 2569Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.122 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,496 Number of extensions: 626 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |