Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_002991 17 4312 NP_002213 16 5631 NP_001093422 16 5631 NP_001161744 16 5631 NP_002215 16 5631 NP_002214 16 5631 XP_006715154 16 5631 XP_006713199 16 5631 XP_006713198 16 5631 XP_006713197 16 5631 XP_005265167 16 5631 XP_006713196 16 5631 XP_006713195 16 5631 XP_005265166 16 5631 XP_006713194 16 5631 NP_776195 16 7355 NP_038478 16 7355 NP_001182143 16 7355 NP_001276904 16 7355 XP_006712537 16 7355 XP_006712536 16 7355 XP_005246557 16 7355 XP_006712535 16 7355 XP_006712534 16 7355 XP_006712533 16 7355 XP_006712532 16 7355 XP_006712531 16 7355 XP_006712530 16 7355 XP_006712529 16 7355 XP_006712528 16 7355 XP_006712527 16 7355 XP_005246549 16 7355 XP_006712526 16 7355 XP_006712525 16 7355 XP_005246546 16 7355 XP_006712524 16 7355 XP_005246545 16 7355 NP_002767 15 9605 NP_665895 15 9605 NP_001070968 15 9605 XP_006723352 15 9605 XP_006723351 15 9605 XP_006723350 15 9605 XP_005259119 15 9605 XP_005259118 15 9605 NP_060848 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 156 RVRAMAIY 163>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 117 RVRAMAIY 124>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 156 RVRAMAIY 163>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 156 RVRAMAIY 163>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 117 RVRAMAIY 124>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 117 RVRAMAIY 124>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 117 RVRAMAIY 124>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 156 RVRAMAIY 163>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 117 RVRAMAIY 124>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 24 RVRAMAIY 31>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 24 RVRAMAIY 31>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RVRAMAIY 9 RVRAMAIY Sbjct: 24 RVRAMAIY 31>NP_002991 Length = 280 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PRVRAMAIY 9 PR++ AIY Sbjct: 37 PRIKKFAIY 45>NP_002213 Length = 2695 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2621 PRMRAMSL 2628>NP_001093422 Length = 2710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2636 PRMRAMSL 2643>NP_001161744 Length = 2743 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2669 PRMRAMSL 2676>NP_002215 Length = 2671 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2603 PRMRAMSL 2610>NP_002214 Length = 2701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2627 PRMRAMSL 2634>XP_006715154 Length = 2700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2632 PRMRAMSL 2639>XP_006713199 Length = 2695 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2621 PRMRAMSL 2628>XP_006713198 Length = 2699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2625 PRMRAMSL 2632>XP_006713197 Length = 2712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2638 PRMRAMSL 2645>XP_005265167 Length = 2719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2645 PRMRAMSL 2652>XP_006713196 Length = 2721 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2647 PRMRAMSL 2654>XP_006713195 Length = 2727 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2653 PRMRAMSL 2660>XP_005265166 Length = 2735 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2661 PRMRAMSL 2668>XP_006713194 Length = 2736 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PRVRAMAI 8 PR+RAM++ Sbjct: 2662 PRMRAMSL 2669>NP_776195 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PRVRAMAIY 9 P RA+A+Y Sbjct: 209 PNRRALAVY 217>NP_038478 Length = 2168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>NP_001182143 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PRVRAMAIY 9 P RA+A+Y Sbjct: 166 PNRRALAVY 174>NP_001276904 Length = 2132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 800 PRIRAM 805>XP_006712537 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_006712536 Length = 2082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 704 PRIRAM 709>XP_005246557 Length = 2095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 717 PRIRAM 722>XP_006712535 Length = 2095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 717 PRIRAM 722>XP_006712534 Length = 2114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 736 PRIRAM 741>XP_006712533 Length = 2116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 738 PRIRAM 743>XP_006712532 Length = 2141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 800 PRIRAM 805>XP_006712531 Length = 2169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 802 PRIRAM 807>XP_006712530 Length = 2176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 800 PRIRAM 805>XP_006712529 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_006712528 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 802 PRIRAM 807>XP_006712527 Length = 2203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_005246549 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 834 PRIRAM 839>XP_006712526 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 834 PRIRAM 839>XP_006712525 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_005246546 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_006712524 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>XP_005246545 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PRVRAM 6 PR+RAM Sbjct: 836 PRIRAM 841>NP_002767 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>NP_665895 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>NP_001070968 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>XP_006723352 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>XP_006723351 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>XP_006723350 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>XP_005259119 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>XP_005259118 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRVRAMAI 8 PRVRA+ + Sbjct: 151 PRVRALQL 158>NP_060848 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRVRAMAIY 9 PR+RA+ ++ Sbjct: 191 PRLRALGLH 199Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.142 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 288,772 Number of extensions: 352 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |