Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 390 NP_996879 18 1935 XP_006710493 18 1935 XP_006710490 18 1935 XP_006710489 18 1935 NP_001963 17 4312 NP_001075 17 4312 XP_006725460 17 4312 XP_005259574 17 4312 NP_588609 16 5631 XP_005259460 16 5631 XP_005259459 16 5631 XP_006721387 16 5631 XP_005256281 16 5631 XP_005256280 16 5631 XP_005256278 16 5631 XP_005256277 16 5631 NP_694989 16 5631 NP_004445 16 7355 NP_001159743 16 7355 NP_001273721 16 7355 NP_001273723 16 7355 NP_001273724 16 7355 NP_001276932 16 7355 NP_001273722 16 7355 NP_694568 16 7355 NP_660337 16 7355 XP_006720926 16 7355 XP_006720925 16 7355 XP_006720924 16 7355 XP_006720923 16 7355 XP_005255218 16 7355 XP_005255217 16 7355 XP_005247794 16 7355 XP_006713802 16 7355 XP_006713801 16 7355 NP_001804 15 9605 NP_001020949 15 9605 NP_003782 15 9605 NP_001273663 15 9605 NP_057524 15 9605 NP_001186978 15 9605 NP_037423 15 9605 NP_443202 15 9605 NP_001184256 15 9605 XP_005262370 15 9605 XP_005262369 15 9605 XP_006724779 15 9605 XP_005260715 15 9605 XP_005260714 15 9605 XP_005259031 15 9605 XP_006723301 15 9605 XP_005259029 15 9605 XP_006723300 15 9605 XP_005259028 15 9605 XP_006716613 15 9605 XP_006716612 15 9605 XP_006716611 15 9605 NP_443189 15 9605>NP_115927 Length = 1321 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PQRQVFSV 8 PQRQVFSV Sbjct: 659 PQRQVFSV 666>NP_996879 Length = 2223 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PQRQVFSVV 9 PQR++FS+V Sbjct: 60 PQRKLFSMV 68>XP_006710493 Length = 1305 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PQRQVFSVV 9 PQR++FS+V Sbjct: 60 PQRKLFSMV 68>XP_006710490 Length = 2158 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PQRQVFSVV 9 PQR++FS+V Sbjct: 60 PQRKLFSMV 68>XP_006710489 Length = 2185 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PQRQVFSVV 9 PQR++FS+V Sbjct: 60 PQRKLFSMV 68>NP_001963 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 P RQVF+V Sbjct: 94 PTRQVFAV 101>NP_001075 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQR VFS Sbjct: 477 PQRDVFS 483>XP_006725460 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 P RQVF+V Sbjct: 94 PTRQVFAV 101>XP_005259574 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 P RQVF+V Sbjct: 94 PTRQVFAV 101>NP_588609 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 450 PEKQVFS 456>XP_005259460 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+R +FS + Sbjct: 105 PERSIFSAI 113>XP_005259459 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+R +FS + Sbjct: 113 PERSIFSAI 121>XP_006721387 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 326 PEKQVFS 332>XP_005256281 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 450 PEKQVFS 456>XP_005256280 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 450 PEKQVFS 456>XP_005256278 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 450 PEKQVFS 456>XP_005256277 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PQRQVFS 7 P++QVFS Sbjct: 450 PEKQVFS 456>NP_694989 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+R +FS + Sbjct: 136 PERSIFSAI 144>NP_004445 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q F+V Sbjct: 186 PQQQTFAV 193>NP_001159743 Length = 1277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 1248 PQQQVFGL 1255>NP_001273721 Length = 1339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 1310 PQQQVFGL 1317>NP_001273723 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 567 PQQQVFGL 574>NP_001273724 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 545 PQQQVFGL 552>NP_001276932 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P Q+FSVV Sbjct: 3 PPIQIFSVV 11>NP_001273722 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 483 PQQQVFGL 490>NP_694568 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+QVF + Sbjct: 623 PQQQVFGL 630>NP_660337 Length = 1748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 609 PQKQTFS 615>XP_006720926 Length = 1383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 610 PQKQTFS 616>XP_006720925 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 610 PQKQTFS 616>XP_006720924 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 538 PQKQTFS 544>XP_006720923 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 610 PQKQTFS 616>XP_005255218 Length = 1750 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 609 PQKQTFS 615>XP_005255217 Length = 1751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PQRQVFS 7 PQ+Q FS Sbjct: 610 PQKQTFS 616>XP_005247794 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P Q+FSVV Sbjct: 28 PPIQIFSVV 36>XP_006713802 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P Q+FSVV Sbjct: 30 PPIQIFSVV 38>XP_006713801 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P Q+FSVV Sbjct: 30 PPIQIFSVV 38>NP_001804 Length = 2701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QRQVFSVV 9 QR++FS++ Sbjct: 1042 QRKIFSLI 1049>NP_001020949 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 145 PQKQKFSL 152>NP_003782 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PQRQVF 6 PQR+VF Sbjct: 128 PQRKVF 133>NP_001273663 Length = 2580 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QRQVFSVV 9 QR++FS++ Sbjct: 1017 QRKIFSLI 1024>NP_057524 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 195 PQKQKFSL 202>NP_001186978 Length = 2715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQVFSVV 9 RQ+FSV+ Sbjct: 214 RQIFSVM 220>NP_037423 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ++ FS+ Sbjct: 1069 PQQEAFSI 1076>NP_443202 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 PQ+ FSVV Sbjct: 54 PQQASFSVV 62>NP_001184256 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 PQ+ FSVV Sbjct: 54 PQQASFSVV 62>XP_005262370 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+RQ SVV Sbjct: 42 PKRQASSVV 50>XP_005262369 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+RQ SVV Sbjct: 42 PKRQASSVV 50>XP_006724779 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+RQ SVV Sbjct: 69 PKRQASSVV 77>XP_005260715 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 PQ+ FSVV Sbjct: 54 PQQASFSVV 62>XP_005260714 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 PQ+ FSVV Sbjct: 54 PQQASFSVV 62>XP_005259031 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 195 PQKQKFSL 202>XP_006723301 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 145 PQKQKFSL 152>XP_005259029 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 145 PQKQKFSL 152>XP_006723300 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 195 PQKQKFSL 202>XP_005259028 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ+Q FS+ Sbjct: 195 PQKQKFSL 202>XP_006716613 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ++ FS+ Sbjct: 411 PQQEAFSI 418>XP_006716612 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ++ FS+ Sbjct: 991 PQQEAFSI 998>XP_006716611 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PQRQVFSV 8 PQ++ FS+ Sbjct: 1069 PQQEAFSI 1076>NP_443189 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQRQVFSVV 9 P+RQ SVV Sbjct: 69 PKRQASSVV 77Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.137 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 519,880 Number of extensions: 831 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |