Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 19 869 NP_000831 17 4312 XP_005250347 17 4312 XP_006716000 17 4312 XP_006713184 17 4312 NP_000830 17 4312 NP_065681 16 7355 NP_066124 16 7355 NP_001127911 16 7355 NP_001127910 16 7355 NP_665696 16 7355 NP_001258547 16 7355 NP_060077 16 7355 NP_689824 16 7355 XP_005259070 16 7355 XP_006717999 16 7355 NP_001127909 16 7355 NP_001231639 15 9605 NP_002047 15 9605 NP_115803 15 9605 NP_000835 15 9605 NP_870989 15 9605 NP_001120795 15 9605 NP_001243738 15 9605 NP_001243742 15 9605 NP_000832 15 9605 NP_001243740 15 9605 NP_001269618 15 9605 NP_005101 15 9605 NP_076982 15 9605 NP_000834 15 9605 NP_002842 15 9605 NP_001243741 15 9605 NP_001269619 15 9605 NP_001269617 15 9605 NP_001193767 15 9605 XP_005252259 15 9605 XP_006717345 15 9605 XP_005252255 15 9605 XP_005252253 15 9605 XP_005252252 15 9605 XP_006716139 15 9605 XP_005250576 15 9605 XP_006716001 15 9605 XP_006715005 15 9605 XP_005265152 15 9605 NP_001193768 15 9605 NP_000836 15 9605>NP_005350 Length = 552 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PNISVASTS 9 PNI VASTS Sbjct: 215 PNIPVASTS 223>NP_000831 Length = 879 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS ASTS Sbjct: 167 PQISYASTS 175>XP_005250347 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS ASTS Sbjct: 167 PQISYASTS 175>XP_006716000 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS ASTS Sbjct: 167 PQISYASTS 175>XP_006713184 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS ASTS Sbjct: 161 PQISYASTS 169>NP_000830 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS ASTS Sbjct: 161 PQISYASTS 169>NP_065681 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PNISVA 6 PNISVA Sbjct: 198 PNISVA 203>NP_066124 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PNISVA 6 PNISVA Sbjct: 198 PNISVA 203>NP_001127911 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NISVASTS 9 NIS ASTS Sbjct: 1023 NISSASTS 1030>NP_001127910 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NISVASTS 9 NIS ASTS Sbjct: 1023 NISSASTS 1030>NP_665696 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NISVASTS 9 NIS ASTS Sbjct: 980 NISSASTS 987>NP_001258547 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN+ AST+ Sbjct: 512 PNVPTASTA 520>NP_060077 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN+ AST+ Sbjct: 513 PNVPTASTA 521>NP_689824 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PNISVAST 8 P+IS AST Sbjct: 469 PDISAAST 476>XP_005259070 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN+ AST+ Sbjct: 513 PNVPTASTA 521>XP_006717999 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PNISVA 6 PNISVA Sbjct: 291 PNISVA 296>NP_001127909 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NISVASTS 9 NIS ASTS Sbjct: 1007 NISSASTS 1014>NP_001231639 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNISVAST 8 P I VAST Sbjct: 486 PEIGVAST 493>NP_002047 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNISVAST 8 P I VAST Sbjct: 468 PEIGVAST 475>NP_115803 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 844 PNSSLLSTS 852>NP_000835 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 175 PQISYASTA 183>NP_870989 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 175 PQISYASTA 183>NP_001120795 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 172 PQISYASTA 180>NP_001243738 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 106 PQISYASTA 114>NP_001243742 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 42 PQISYASTA 50>NP_000832 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 175 PQISYASTA 183>NP_001243740 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 175 PQISYASTA 183>NP_001269618 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 337 PNLAVAS 343>NP_005101 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNISVAST 8 P I VAST Sbjct: 469 PEIGVAST 476>NP_076982 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 410 PNLAVAS 416>NP_000834 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 170 PQISYASTA 178>NP_002842 Length = 2315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 496 PNTSLNSTS 504>NP_001243741 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 6 PQISYASTA 14>NP_001269619 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 342 PNLAVAS 348>NP_001269617 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 409 PNLAVAS 415>NP_001193767 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 496 PNTSLNSTS 504>XP_005252259 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 111 PNLAVAS 117>XP_006717345 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 337 PNLAVAS 343>XP_005252255 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 342 PNLAVAS 348>XP_005252253 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 371 PNLAVAS 377>XP_005252252 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PNISVAS 7 PN++VAS Sbjct: 372 PNLAVAS 378>XP_006716139 Length = 1869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 496 PNTSLNSTS 504>XP_005250576 Length = 2308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 496 PNTSLNSTS 504>XP_006716001 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 172 PQISYASTA 180>XP_006715005 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNISVAST 8 P I VAST Sbjct: 469 PEIGVAST 476>XP_005265152 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 175 PQISYASTA 183>NP_001193768 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 PN S+ STS Sbjct: 496 PNTSLNSTS 504>NP_000836 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNISVASTS 9 P IS AST+ Sbjct: 172 PQISYASTA 180Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.291 0.103 0.251 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 296,787 Number of extensions: 363 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |