Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136113 18 1135 XP_005256435 18 1935 NP_000537 17 2528 NP_001263689 17 2528 NP_001119584 17 2528 NP_001119586 17 2528 NP_001263625 17 2528 NP_001119590 17 2528 NP_001263690 17 2528 NP_001119585 17 2528 NP_001263624 17 2528 NP_005112 17 2528 NP_004937 17 2528 NP_001177258 17 4312 NP_001680 17 4312 NP_001002258 17 4312 NP_078997 17 4312 NP_055723 16 5631 NP_001010924 16 5631 NP_001166937 16 7355 NP_056480 16 7355 NP_001135446 16 7355 NP_071372 16 7355 NP_001135445 16 7355 NP_001157666 16 7355 NP_001129575 16 7355 NP_001157661 16 7355 NP_005808 16 7355 NP_001273148 16 7355 NP_443139 16 7355 XP_006719682 16 7355 XP_006719681 16 7355 XP_006719680 16 7355 XP_006719284 16 7355 XP_006719283 16 7355 XP_006719282 16 7355 XP_005245872 16 7355 XP_005245870 16 7355 XP_006710576 16 7355 XP_005245869 16 7355 XP_006710575 16 7355 XP_005245868 16 7355 XP_005245867 16 7355 XP_005245866 16 7355 NP_055914 15 9605 NP_055927 15 9605 NP_055844 15 9605 NP_066934 15 9605 NP_000597 15 9605 NP_001164639 15 9605 NP_001164638 15 9605 NP_001139332 15 9605 NP_821174 15 9605 NP_663622 15 9605 NP_036397 15 9605 NP_060340 15 9605 XP_006724287 15 9605 XP_006721545 15 9605 XP_006721544 15 9605 XP_006721543 15 9605 XP_006721542 15 9605 XP_006721541 15 9605 XP_006716942 15 9605 XP_005251162 15 9605 XP_005251161 15 9605 XP_005251160 15 9605 XP_005251159 15 9605 XP_005270716 15 9605 XP_005270711 15 9605 XP_005270710 15 9605 XP_006710538 15 9605 XP_005270709 15 9605 NP_001164637 15 9605 NP_001139333 15 9605 NP_001138560 15 9605 NP_115267 15 9605 NP_061746 15 9605>NP_001136113 Length = 1045 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PLSSSVLSQ 9 PLS+S+LSQ Sbjct: 578 PLSASILSQ 586>XP_005256435 Length = 292 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS SV+SQ Sbjct: 21 PLSGSVISQ 29>NP_000537 Length = 393 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 92 PLSSSVPSQ 100>NP_001263689 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 53 PLSSSVPSQ 61>NP_001119584 Length = 393 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 92 PLSSSVPSQ 100>NP_001119586 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 92 PLSSSVPSQ 100>NP_001263625 Length = 302 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 53 PLSSSVPSQ 61>NP_001119590 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 53 PLSSSVPSQ 61>NP_001263690 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 53 PLSSSVPSQ 61>NP_001119585 Length = 346 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 92 PLSSSVPSQ 100>NP_001263624 Length = 307 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLSSSV SQ Sbjct: 53 PLSSSVPSQ 61>NP_005112 Length = 2174 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PL SS+LSQ Sbjct: 1468 PLDSSLLSQ 1476>NP_004937 Length = 1830 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PL +SVLSQ Sbjct: 1742 PLKASVLSQ 1750>NP_001177258 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PLSSSVLSQ 9 P+S+SVLS+ Sbjct: 24 PISASVLSR 32>NP_001680 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PLSSSVLSQ 9 P+S+SVLS+ Sbjct: 24 PISASVLSR 32>NP_001002258 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PLSSSVLSQ 9 P+S+SVLS+ Sbjct: 24 PISASVLSR 32>NP_078997 Length = 3616 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLSSSVL Sbjct: 509 PLSSSVL 515>NP_055723 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS SVL++ Sbjct: 15 PLSGSVLAE 23>NP_001010924 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSSSVLSQ 9 PLSS +SQ Sbjct: 637 PLSSQAISQ 645>NP_001166937 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+SVL+ Sbjct: 170 PLSASVLA 177>NP_056480 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+SVL+ Sbjct: 203 PLSASVLA 210>NP_001135446 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>NP_071372 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>NP_001135445 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>NP_001157666 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSSSVLSQ 9 LSSS+L+Q Sbjct: 370 LSSSILAQ 377>NP_001129575 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 647 PLSDSILAE 655>NP_001157661 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSSSVLSQ 9 LSSS+L+Q Sbjct: 381 LSSSILAQ 388>NP_005808 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSSSVLSQ 9 LSSS+L+Q Sbjct: 382 LSSSILAQ 389>NP_001273148 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 149 PLSDSILAE 157>NP_443139 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 637 PLSDSILAE 645>XP_006719682 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+SVL+ Sbjct: 208 PLSASVLA 215>XP_006719681 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+SVL+ Sbjct: 175 PLSASVLA 182>XP_006719680 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+SVL+ Sbjct: 208 PLSASVLA 215>XP_006719284 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 235 PLSDSILAE 243>XP_006719283 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 527 PLSDSILAE 535>XP_006719282 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 527 PLSDSILAE 535>XP_005245872 Length = 1163 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_005245870 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_006710576 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_005245869 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_006710575 Length = 1196 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_005245868 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_005245867 Length = 1201 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>XP_005245866 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 27 PLSSSVSS 34>NP_055914 Length = 1202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 605 PLSASVL 611>NP_055927 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>NP_055844 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 437 PLSHSILTE 445>NP_066934 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS+ ++SQ Sbjct: 925 PLSALIISQ 933>NP_000597 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 P+S SVLS Sbjct: 156 PVSDSVLS 163>NP_001164639 Length = 1201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 604 PLSASVL 610>NP_001164638 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 628 PLSASVL 634>NP_001139332 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 437 PLSHSILTE 445>NP_821174 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSSSVLSQ 9 PLS S+L + Sbjct: 616 PLSDSILGE 624>NP_663622 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 178 PLSNTILS 185>NP_036397 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PL+SSVL Sbjct: 15 PLASSVL 21>NP_060340 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSSSVLSQ 9 PLS S+L + Sbjct: 617 PLSDSILGE 625>XP_006724287 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PL+SSVL Sbjct: 15 PLASSVL 21>XP_006721545 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 418 PLSASVL 424>XP_006721544 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 581 PLSASVL 587>XP_006721543 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 605 PLSASVL 611>XP_006721542 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 610 PLSASVL 616>XP_006721541 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 610 PLSASVL 616>XP_006716942 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS+ ++SQ Sbjct: 797 PLSALIISQ 805>XP_005251162 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 73 PLSNTILS 80>XP_005251161 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 178 PLSNTILS 185>XP_005251160 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 178 PLSNTILS 185>XP_005251159 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 178 PLSNTILS 185>XP_005270716 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>XP_005270711 Length = 1797 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>XP_005270710 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>XP_006710538 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>XP_005270709 Length = 1805 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLSSSVLS 8 PLSSSV S Sbjct: 114 PLSSSVHS 121>NP_001164637 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLS+SVL Sbjct: 607 PLSASVL 613>NP_001139333 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLSSSVLSQ 9 PLS S+L++ Sbjct: 437 PLSHSILTE 445>NP_001138560 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PLSSSVLS 8 PLS+++LS Sbjct: 178 PLSNTILS 185>NP_115267 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLSSS++ Sbjct: 431 PLSSSII 437>NP_061746 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSSSVL 7 PLSSS++ Sbjct: 431 PLSSSII 437Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.109 0.252 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,467 Number of extensions: 823 Number of successful extensions: 77 Number of sequences better than 10000.0: 77 Number of HSP's gapped: 77 Number of HSP's successfully gapped: 77 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |